RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 DUSP3P51452 185 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 CDH12P55289 794 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 GRB7Q14451 532 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ABRAXAS2Q15018 415 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 OTUD1Q5VV17 481 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ASPGQ86U10 573 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 RANBP3LQ86VV4 465 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 RBM4BQ9BQ04 359 aaKnown RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ADI1Q9BV57 179 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 RBM4Q9BWF3 364 aaKnown RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PRSS16Q9NQE7 514 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 THUMPD1Q9NXG2 353 aaKnown RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PTGDR2Q9Y5Y4 395 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 MCIDASD6RGH6 385 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 E7ENX8 843 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ALPPP05187 535 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 C1SP09871 688 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PIK3CBP42338 1070 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 XIAPP98170 497 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 HHEXQ03014 270 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PTSQ03393 145 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PTPRRQ15256 657 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 IRF4Q15306 451 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 NAIF1Q69YI7 327 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 PTCHD4Q6ZW05 846 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ADGRD2Q7Z7M1 963 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 CLVS1Q8IUQ0 354 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 SLC30A8Q8IWU4 369 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 GJD3Q8N144 294 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 ARL10Q8N8L6 244 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 FATE1Q969F0 183 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 COL21A1Q96P44 957 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 CHID1Q9BWS9 393 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 NEUROD4Q9HD90 331 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 C8orf4Q9NR00 106 aa7.16□□□□□ -1.26
SYNE1-213ENST00000448038 IFT80Q9P2H3 777 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-213ENST00000448038 IGLV3-25P01717 112 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 NR2F6P10588 404 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PIM1P11309 404 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 P2RY2P41231 377 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 ST13P50502 369 aaKnown RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 CTSCP53634 463 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 HYAL2Q12891 473 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TRAP1Q12931 704 aaKnown RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PTGR1Q14914 329 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TAF13Q15543 124 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 FAM214AQ32MH5 1076 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 KLHL12Q53G59 568 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 MANEALQ5VSG8 457 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 C1orf53Q5VUE5 145 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 ZNF534Q76KX8 674 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 WBP2Q969T9 261 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 CHFRQ96EP1 664 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 KCNH6Q9H252 994 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 NOL6Q9H6R4 1146 aaKnown RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TPT1P8Q9HAU6 139 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PREBQ9HCU5 417 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 P2RX2Q9UBL9 471 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PCTPQ9UKL6 214 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 FADS3Q9Y5Q0 445 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 FEZF1A0PJY2 475 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PRORSD1PA6NEY8 169 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 FADS2P1A8MWK0 482 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 G3V2L1 256 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 DUX1O43812 170 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 C6orf47O95873 294 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 HSD3B1P14060 373 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 HSD3B2P26439 372 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 CTSKP43235 329 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 ATP4BP51164 291 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 SH3BP2P78314 561 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 SIM2Q14190 667 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 SFRP1Q8N474 314 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 OR4K1Q8NGD4 311 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 OR5AR1Q8NGP9 310 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 ZDHHC1Q8WTX9 485 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 NXPE3Q969Y0 559 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 L3HYPDHQ96EM0 354 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TRAPPC9Q96Q05 1148 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 REEP4Q9H6H4 257 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TBC1D23Q9NUY8 699 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 STOX2Q9P2F5 926 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 PRSS21Q9Y6M0 314 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TPST2O60704 377 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 REM1O75628 298 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 KRT33AO76009 404 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 OR6B1O95007 311 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 RAP2AP10114 183 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 XRCC1P18887 633 aaPredicted RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 JAK1P23458 1154 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 SRP54P61011 504 aaKnown RBP7.15□□□□□ -1.26
SYNE1-213ENST00000448038 NEK5Q6P3R8 708 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 RTL4Q6ZR62 310 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 USP53Q70EK8 1073 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 ZFAND4Q86XD8 727 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 TMEM126BQ8IUX1 230 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 CNTN4Q8IWV2 1026 aa7.15□□□□□ -1.26
SYNE1-213ENST00000448038 CBR4Q8N4T8 237 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms