RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ZFYVE21Q9BQ24 234 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 EML4Q9HC35 981 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 PRM3Q9NNZ6 103 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 SLCO1B3Q9NPD5 702 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 OCIAD1Q9NX40 245 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZDHHC2Q9UIJ5 367 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 CLCA2Q9UQC9 943 aa17.22■□□□□ 0.35
TRAPPC4-203ENST00000447216 FAM149AA5PLN7 773 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 EFCAB7A8K855 629 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 KLF11O14901 512 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 MAP3K7O43318 606 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 HYAL3O43820 417 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 CRCPO75575 148 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 ENO1P06733 434 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 CXCR2P25025 360 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 HMOX2P30519 316 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 SCTRP47872 440 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 HTR6P50406 440 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 VSX2P58304 361 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 RPS15AP62244 130 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 OCRLQ01968 901 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 GALNT1Q10472 559 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 DDX39BQ13838 428 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 GGTA1PQ4G0N0 100 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 TMTC4Q5T4D3 741 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 SCIMPQ6UWF3 145 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 MCATQ8IVS2 390 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZNF781Q8N8C0 355 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 MFSD9Q8NBP5 474 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 OR7G3Q8NG95 312 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 METTL6Q8TCB7 284 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 ADAMTS14Q8WXS8 1223 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 MACROD1Q9BQ69 325 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 STRADBQ9C0K7 418 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 NT5DC2Q9H857 520 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 FARSBQ9NSD9 589 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 PNPOQ9NVS9 261 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 THAP1Q9NVV9 213 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 PCDHGA4Q9Y5G9 962 aa17.21■□□□□ 0.35
TRAPPC4-203ENST00000447216 PMS2P1A4D2B8 440 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 TCP11X1B4DZS4 312 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 TMEM150CB9EJG8 249 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 H0YGG7 62 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 MANBAO00462 879 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 AZIN1O14977 448 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 SERPIND1P05546 499 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 CCL4P13236 92 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 NEK2P51955 445 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 ARF3P61204 181 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 ZC3H12BQ5HYM0 836 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 FAM47EQ6ZV65 393 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 DGLUCYQ7Z3D6 616 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 VN1R5Q7Z5H4 357 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 VN1R4Q7Z5H5 301 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 LAS2Q8IYD9 372 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 CHCHD4Q8N4Q1 142 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 TBC1D19Q8N5T2 526 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 AGBL5Q8NDL9 886 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 RNF31Q96EP0 1072 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 OR2A5Q96R48 311 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 SLC29A3Q9BZD2 475 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 CHRNA10Q9GZZ6 450 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 ILKAPQ9H0C8 392 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 STARD5Q9NSY2 213 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 SIDT1Q9NXL6 827 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 PLCL2Q9UPR0 1127 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 RAP2CQ9Y3L5 183 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 TRAF6Q9Y4K3 522 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 SEC16AO15027 2179 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 SCN2AQ99250 2005 aa17.2■□□□□ 0.34
TRAPPC4-203ENST00000447216 FER1L5A0AVI2 2057 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 H0YIV9 168 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 TMX2-CTNND1H3BSU7 103 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 HGSO14964 777 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 P2RX6O15547 441 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 SH3BGRLO75368 114 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 EIF2S1P05198 315 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 RELAQ04206 551 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 FOXM1Q08050 763 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 TARDBPQ13148 414 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 RGS9BPQ6ZS82 235 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 OR1L3Q8NH93 324 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 HUS1BQ8NHY5 278 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 WDR20Q8TBZ3 569 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 CCT6BQ92526 530 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 N4BP2L2Q92802 583 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 UBE2E3Q969T4 207 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 MAGEB10Q96LZ2 347 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 OR6C1Q96RD1 312 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 HBEGFQ99075 208 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 MTERF1Q99551 399 aaKnown RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 SARGQ9BW04 601 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 PITHD1Q9GZP4 211 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 SPRTNQ9H040 489 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 FGF21Q9NSA1 209 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 MARCOQ9UEW3 520 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 LOXL2Q9Y4K0 774 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 PCDHGA11Q9Y5H2 935 aa17.19■□□□□ 0.34
TRAPPC4-203ENST00000447216 AP1M2Q9Y6Q5 423 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms