RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ISL2Q96A47 359 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 THAP11Q96EK4 314 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 TMEM79Q9BSE2 394 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 SLC25A18Q9H1K4 315 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 EPB41L4BQ9H329 900 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 SYNPO2LQ9H987 977 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 RUVBL1Q9Y265 456 aaKnown RBP22.84■■□□□ 1.25
C9orf3-207ENST00000445181 PADI2Q9Y2J8 665 aa22.84■■□□□ 1.25
C9orf3-207ENST00000445181 HELZ2Q9BYK8 2649 aaKnown RBP22.83■■□□□ 1.25
C9orf3-207ENST00000445181 KCNE1BA0A087WTH5 132 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 CDC14CA4D256 554 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 TAPBPO15533 448 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 STK16O75716 305 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 STATHP02808 62 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 PIM1P11309 404 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-207ENST00000445181 GCAP28676 217 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 BCL6P41182 706 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 MAGEA12P43365 314 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 NFKB2Q00653 900 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 KCNAB2Q13303 367 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 PRTGQ2VWP7 1150 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 ADGRD1Q6QNK2 874 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 PRICKLE2Q7Z3G6 844 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 SNX31Q8N9S9 440 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 RHEBL1Q8TAI7 183 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 ESAMQ96AP7 390 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 MTBPQ96DY7 904 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 ATOH8Q96SQ7 321 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 PELI2Q9HAT8 420 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 DNAJC11Q9NVH1 559 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 PSMC3IPQ9P2W1 217 aaPredicted RBP22.83■■□□□ 1.25
C9orf3-207ENST00000445181 FETUBQ9UGM5 382 aa22.83■■□□□ 1.25
C9orf3-207ENST00000445181 IQANK1A0A1B0GTG1 560 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 CCDC189A1A4V9 331 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 P2RX6O15547 441 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 OR1F1O43749 312 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 CCNT2O60583 730 aaKnown RBP22.82■■□□□ 1.24
C9orf3-207ENST00000445181 CAPN1P07384 714 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 GNAZP19086 355 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 GGT5P36269 586 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 CDC16Q13042 620 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 NXPE4Q6UWF7 544 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 SYVN1Q86TM6 617 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 KLHDC8AQ8IYD2 350 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 MFSD9Q8NBP5 474 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 OR4K1Q8NGD4 311 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 APOBEC4Q8WW27 367 aaKnown RBP22.82■■□□□ 1.24
C9orf3-207ENST00000445181 SCYL1Q96KG9 808 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 C10orf90Q96M02 699 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 AIF1LQ9BQI0 150 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 CAPS2Q9BXY5 557 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 PTBP2Q9UKA9 531 aaKnown RBP22.82■■□□□ 1.24
C9orf3-207ENST00000445181 TCFL5Q9UL49 500 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 MAU2Q9Y6X3 613 aa22.82■■□□□ 1.24
C9orf3-207ENST00000445181 LCMT2O60294 686 aaKnown RBP22.81■■□□□ 1.24
C9orf3-207ENST00000445181 CD63P08962 238 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 GFAPP14136 432 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 OR1D4P47884 311 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 EMP3P54852 163 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 NDUFA9Q16795 377 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 GARNL3Q5VVW2 1013 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 ASPGQ86U10 573 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 PLD6Q8N2A8 252 aaKnown RBP22.81■■□□□ 1.24
C9orf3-207ENST00000445181 DTWD1Q8N5C7 304 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 CAMKVQ8NCB2 501 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 COL26A1Q96A83 441 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 CD244Q9BZW8 370 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 TBK1Q9UHD2 729 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 TUBD1Q9UJT1 453 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 FER1L5A0AVI2 2057 aa22.81■■□□□ 1.24
C9orf3-207ENST00000445181 TRBC2A0A5B9 178 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 CLGNO14967 610 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 H2AFYO75367 372 aaKnown RBP22.8■■□□□ 1.24
C9orf3-207ENST00000445181 MED26O95402 600 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 SERPIND1P05546 499 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 COL6A2P12110 1019 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 PDK4Q16654 411 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 ERCC6LQ2NKX8 1250 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 TSNAXIP1Q2TAA8 658 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 FAM69BQ5VUD6 431 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 PRMT9Q6P2P2 845 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 VN1R4Q7Z5H5 301 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.8■■□□□ 1.24
C9orf3-207ENST00000445181 SLC13A3Q8WWT9 602 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 GPR78Q96P69 363 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 MACROD1Q9BQ69 325 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 ZNF304Q9HCX3 659 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 ZNF358Q9NW07 568 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 GPRC5BQ9NZH0 403 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 CPSF2Q9P2I0 782 aaKnown RBP22.8■■□□□ 1.24
C9orf3-207ENST00000445181 CDC14AQ9UNH5 594 aa22.8■■□□□ 1.24
C9orf3-207ENST00000445181 RECKO95980 971 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 SHBGP04278 402 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 RBP1P09455 135 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 SLC35G6P0C7Q6 338 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 ITGAXP20702 1163 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 VARSP26640 1264 aaKnown RBP22.79■■□□□ 1.24
C9orf3-207ENST00000445181 REEP5Q00765 189 aa22.79■■□□□ 1.24
C9orf3-207ENST00000445181 RBBP5Q15291 538 aaKnown RBP22.79■■□□□ 1.24
C9orf3-207ENST00000445181 WDR93Q6P2C0 686 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms