RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 BTBD16Q32M84 506 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 MINDY4Q4G0A6 757 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 CCDC137Q6PK04 289 aaKnown RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 CPEB2Q7Z5Q1 589 aaKnown RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 OR51Q1Q8NH59 317 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 SUN3Q8TAQ9 357 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 EEF1AKMT1Q8WVE0 214 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 MARVELD3Q96A59 401 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 ALKBH8Q96BT7 664 aaKnown RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 AARSD1Q9BTE6 412 aaKnown RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 ATG10Q9H0Y0 220 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 XAB2Q9HCS7 855 aaKnown RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 CCDC177Q9NQR7 707 aaPredicted RBP14.6□□□□□ -0.07
SEC13-213ENST00000445064 HCN3Q9P1Z3 774 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 COPG2Q9UBF2 871 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 ADAMTS6Q9UKP5 1117 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 SH2B3Q9UQQ2 575 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 NEU2Q9Y3R4 380 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 COMMD10Q9Y6G5 202 aa14.6□□□□□ -0.07
SEC13-213ENST00000445064 KCNE1BA0A087WTH5 132 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 TRGV8A0A0C4DH27 118 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 PRSS44E7EML9 344 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 SGK494L7N484 410 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 HNRNPRO43390 633 aaKnown RBP14.59□□□□□ -0.07
SEC13-213ENST00000445064 PRAMEF2O60811 474 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 WISP2O76076 250 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 PRF1P14222 555 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 HRH2P25021 359 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 BCL6P41182 706 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 XCR1P46094 333 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 RPS15AP62244 130 aaKnown RBP14.59□□□□□ -0.07
SEC13-213ENST00000445064 TBPL1P62380 186 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 AP2B1P63010 937 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 HSP90AA5PQ58FG0 334 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 FCRLBQ6BAA4 426 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 TMEM207Q6UWW9 146 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 LRRC8AQ8IWT6 810 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 LMNTD2Q8IXW0 634 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 RASGEF1CQ8N431 466 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 KCT2Q8NC54 265 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 DNAJB8Q8NHS0 232 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 ZCCHC10Q8TBK6 192 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 CALML6Q8TD86 181 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 MCOLN3Q8TDD5 553 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 TM4SF19Q96DZ7 209 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 CCDC138Q96M89 665 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 NDNQ99608 321 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 RNF32Q9H0A6 362 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 IARS2Q9NSE4 1012 aaKnown RBP14.59□□□□□ -0.07
SEC13-213ENST00000445064 ABI3Q9P2A4 366 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 ENTPD4Q9Y227 616 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 PDE10AQ9Y233 779 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 NOTCH2Q04721 2471 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 POLEQ07864 2286 aa14.59□□□□□ -0.07
SEC13-213ENST00000445064 ITPR2Q14571 2701 aa14.58□□□□□ -0.07
SEC13-213ENST00000445064 CNTRLQ7Z7A1 2325 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 CRYABP02511 175 aaKnown RBP14.58□□□□□ -0.08
SEC13-213ENST00000445064 MAGEA3P43357 314 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 TIAL1Q01085 375 aaKnown RBP eCLIP14.58□□□□□ -0.08
SEC13-213ENST00000445064 PMP22Q01453 160 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 NAE1Q13564 534 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 TMEM214Q6NUQ4 689 aaKnown RBP14.58□□□□□ -0.08
SEC13-213ENST00000445064 AGTRAPQ6RW13 159 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 ANKRD37Q7Z713 158 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 SLC26A11Q86WA9 606 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 NAT8LQ8N9F0 302 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
SEC13-213ENST00000445064 CAMKVQ8NCB2 501 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.08
SEC13-213ENST00000445064 ANKHQ9HCJ1 492 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 SEC14L3Q9UDX4 400 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 TEKT2Q9UIF3 430 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 TRMT6Q9UJA5 497 aaKnown RBP14.58□□□□□ -0.08
SEC13-213ENST00000445064 CPAMD8Q8IZJ3 1885 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 SCN3AQ9NY46 2000 aa14.58□□□□□ -0.08
SEC13-213ENST00000445064 EIF3FO00303 357 aaPredicted RBP14.57□□□□□ -0.08
SEC13-213ENST00000445064 CCL21O00585 134 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 MYBL2P10244 700 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 TNFRSF8P28908 595 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PTK6Q13882 451 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 ZNF766Q5HY98 468 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 ACER2Q5QJU3 275 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PLAG1Q6DJT9 500 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 CAPN13Q6MZZ7 669 aaPredicted RBP14.57□□□□□ -0.08
SEC13-213ENST00000445064 UGT3A1Q6NUS8 523 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 H3F3CQ6NXT2 135 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PAQR3Q6TCH7 311 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 C17orf64Q86WR6 236 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PDSS2Q86YH6 399 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 BEST3Q8N1M1 668 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 SLC13A3Q8WWT9 602 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 THAP11Q96EK4 314 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PBKQ96KB5 322 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 ZNF354BQ96LW1 612 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 FAM167BQ9BTA0 163 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PCBD2Q9H0N5 130 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 KCNK13Q9HB14 408 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 PARVBQ9HBI1 364 aa14.57□□□□□ -0.08
SEC13-213ENST00000445064 C19orf25Q9UFG5 118 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms