RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 LRRK2Q5S007 2527 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 FAM95CA0A1B0GW59 222 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 NPEPPSL1A6NEC2 478 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 IDSB3KWA1 339 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 KIF2AO00139 706 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 SLC16A5O15375 505 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 DNAJB6O75190 326 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 URI1O94763 535 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 KLHL18O94889 574 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 WISP3O95389 354 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 GUCA1CO95843 209 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 IL1RNP18510 177 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 SAT1P21673 171 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 SSTR1P30872 391 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 TAS2R39P59534 338 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 IL2P60568 153 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 OCA2Q04671 838 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 EEF1A2Q05639 463 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 MGAT5Q09328 741 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 MRPL49Q13405 166 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 UBAP2LQ14157 1087 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 C18orf21Q32NC0 220 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 CATSPEREQ5SY80 951 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 GARNL3Q5VVW2 1013 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 LRRC8EQ6NSJ5 796 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 TMEM214Q6NUQ4 689 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 IGFL2Q6UWQ7 119 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 IGFL3Q6UXB1 125 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 STRA8Q7Z7C7 330 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 ZBED8Q8IZ13 594 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 OR56A3Q8NH54 315 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 ZCCHC10Q8TBK6 192 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 RERGQ96A58 199 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 FBXL8Q96CD0 374 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 SNRNP40Q96DI7 357 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 MVB12AQ96EY5 273 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 C16orf45Q96MC5 204 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 YIPF2Q9BWQ6 316 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 UNKQ9C0B0 810 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 DRC3Q9H069 523 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 RAB17Q9H0T7 212 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 ZNF160Q9HCG1 818 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 ARL15Q9NXU5 204 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 UTP6Q9NYH9 597 aaKnown RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 WHRNQ9P202 907 aa10.31□□□□□ -0.76
SF3A1-203ENST00000444440 CORO1CQ9ULV4 474 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 RP1L1Q8IWN7 2480 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-203ENST00000444440 KCNE1BA0A087WTH5 132 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 IGHV1-45A0A0A0MS14 117 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 TCP11X1B4DZS4 312 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 SGK494L7N484 410 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 BMP10O95393 424 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 HPP00738 406 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 ACPPP15309 386 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 EMP2P54851 167 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 GPX6P59796 221 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 RPS15AP62244 130 aaKnown RBP10.3□□□□□ -0.76
SF3A1-203ENST00000444440 CAV1Q03135 178 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 FAM53BQ14153 422 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 PCOLCEQ15113 449 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 DUPD1Q68J44 220 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 Q6ZS92 163 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 LANCL3Q6ZV70 420 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 SLC26A11Q86WA9 606 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 C17orf64Q86WR6 236 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 CISD2Q8N5K1 135 aaKnown RBP10.3□□□□□ -0.76
SF3A1-203ENST00000444440 GALNT11Q8NCW6 608 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 OR4K1Q8NGD4 311 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 PSMF1Q92530 271 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 ZNF592Q92610 1267 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 NEIL2Q969S2 332 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 NACC2Q96BF6 587 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 PDLIM5Q96HC4 596 aaKnown RBP10.3□□□□□ -0.76
SF3A1-203ENST00000444440 THOC3Q96J01 351 aaKnown RBP10.3□□□□□ -0.76
SF3A1-203ENST00000444440 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 TSNARE1Q96NA8 513 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 TGIF2Q9GZN2 237 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 AICDAQ9GZX7 198 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 CAB39LQ9H9S4 337 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 SAYSD1Q9NPB0 183 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 MKKSQ9NPJ1 570 aaPredicted RBP10.3□□□□□ -0.76
SF3A1-203ENST00000444440 SLAMF7Q9NQ25 335 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 ASF1BQ9NVP2 202 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 HCN3Q9P1Z3 774 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 ZFATQ9P243 1243 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 B3GNT3Q9Y2A9 372 aa10.3□□□□□ -0.76
SF3A1-203ENST00000444440 USP9YO00507 2555 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 LOC102723996A0A087X1L8 192 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 IGHV3-20A0A0C4DH32 117 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 A0A1W2PQ72 361 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ZNF860A6NHJ4 632 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 C4orf51C9J302 202 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 MAP2K7O14733 419 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 EIF3HO15372 352 aaKnown RBP eCLIP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 RDH16O75452 317 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 IGHEP01854 428 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 ILF2Q12905 390 aaKnown RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 WHAMMP3Q1A5X7 153 aa10.29□□□□□ -0.76
SF3A1-203ENST00000444440 UBAP2Q5T6F2 1119 aaKnown RBP10.29□□□□□ -0.76
SF3A1-203ENST00000444440 CAPN13Q6MZZ7 669 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms