RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AK4P27144 223 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-201ENST00000442201 IFITM2Q01629 132 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 ILF3Q12906 894 aaKnown RBP eCLIP7.8□□□□□ -1.16
CCDC39-201ENST00000442201 CLCA4Q14CN2 919 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 ABRAXAS2Q15018 415 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 LIPJQ5W064 366 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 OGFOD2Q6N063 350 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 ABRAXAS1Q6UWZ7 409 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 WASH2PQ6VEQ5 465 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 SLC36A4Q6YBV0 504 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 RNF165Q6ZSG1 346 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 SLC22A18ASQ8N1D0 253 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 MARVELD2Q8N4S9 558 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 DEFB119Q8N690 84 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 SLC6A18Q96N87 628 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 IL17FQ96PD4 163 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 HBEGFQ99075 208 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 ORAI3Q9BRQ5 295 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 MVB12BQ9H7P6 319 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 WASH6PQ9NQA3 447 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 ZNF490Q9ULM2 529 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-201ENST00000442201 PLAGL1Q9UM63 463 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 DYRK1BQ9Y463 629 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 HEBP2Q9Y5Z4 205 aa7.8□□□□□ -1.16
CCDC39-201ENST00000442201 OR52A4PA6NMU1 304 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 E7EQ34 232 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 K7ESF4 209 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SLC28A1O00337 649 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRAMEF4O60810 478 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 JUPP14923 745 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DDX5P17844 614 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PIK3R1P27986 724 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRDX6P30041 224 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 HNF4AP41235 474 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ENTPD1P49961 510 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CDK9P50750 372 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DSTNP60981 165 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PCDH1Q08174 1060 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SQLEQ14534 574 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NR6A1Q15406 480 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TCEA2Q15560 299 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 RPE65Q16518 533 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ZNF829Q3KNS6 432 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 KCTD21Q4G0X4 260 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ATP6AP1LQ52LC2 224 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SGO1Q5FBB7 561 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRAMEF9Q5VWM5 478 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TUBA3EQ6PEY2 450 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SUSD1Q6UWL2 747 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 Q6ZSR9 355 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SPATA19Q7Z5L4 167 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DCP2Q8IU60 420 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 RGL4Q8IZJ4 473 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NATD1Q8N6N6 113 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SELENOMQ8WWX9 145 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 BTBD9Q96Q07 612 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CIB1Q99828 191 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 BTBD10Q9BSF8 475 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 HAUS8Q9BT25 410 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 TBC1D29Q9UFV1 150 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 GIMAP2Q9UG22 337 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 LOC100653049A0A140TA62 436 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 MEI4A8MW99 385 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 RGS14O43566 566 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PEX14O75381 377 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 KRT34O76011 436 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CLPTM1O96005 669 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRR35P0CG20 571 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 THRAP10827 490 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ERGP11308 486 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NPPBP16860 134 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CPA2P48052 419 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 ATP4BP51164 291 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 BLKP51451 505 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SIGLEC14Q08ET2 396 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 DOC2AQ14183 400 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FASTKQ14296 549 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 RPS6KA2Q15349 733 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 IMPG1Q17R60 797 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 KIF19Q2TAC6 998 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRAMEF14Q5SWL7 426 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PRAMEF13Q5VWM6 474 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CLVS1Q8IUQ0 354 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 LRRC56Q8IYG6 542 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 POU5F2Q8N7G0 328 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 OR2T11Q8NH01 316 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SETD7Q8WTS6 366 aaKnown RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 USP7Q93009 1102 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 NEIL2Q969S2 332 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 SH3KBP1Q96B97 665 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PPP3R2Q96LZ3 170 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 CAMK1GQ96NX5 476 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 RAB11FIP5Q9BXF6 653 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 GRIP2Q9C0E4 1043 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 FANCEQ9HB96 536 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 GPR27Q9NS67 375 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PCOLCE2Q9UKZ9 415 aa7.79□□□□□ -1.16
CCDC39-201ENST00000442201 PNMA8BQ9ULN7 279 aaPredicted RBP7.79□□□□□ -1.16
CCDC39-201ENST00000442201 B3GNT3Q9Y2A9 372 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms