RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ENO2P09104 434 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 ZNF37AP17032 561 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 SLC26A3P40879 764 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 CCR8P51685 355 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 CSNK1G2P78368 415 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 MAT1AQ00266 395 aaKnown RBP18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 C2orf54Q08AI8 447 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 SYT16Q17RD7 645 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 DUPD1Q68J44 220 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 ASPGQ86U10 573 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 SLC26A11Q86WA9 606 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 AMER3Q8N944 861 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 OR9A4Q8NGU2 314 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 PYROXD1Q8WU10 500 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 CDKL2Q92772 493 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 WDR77Q9BQA1 342 aaPredicted RBP18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 SGPP1Q9BX95 441 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 ANKHQ9HCJ1 492 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 SAYSD1Q9NPB0 183 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 MKL2Q9ULH7 1088 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 PSAT1Q9Y617 370 aa18.85■□□□□ 0.61
SHROOM1-204ENST00000440118 NPEPPSL1A6NEC2 478 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 SERPIND1P05546 499 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 IL1RNP18510 177 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 PLEKHN1Q494U1 663 aaPredicted RBP18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 MINDY4Q4G0A6 757 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 IGFL3Q6UXB1 125 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 VN1R4Q7Z5H5 301 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 ZC3HC1Q86WB0 502 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 KBTBD2Q8IY47 623 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 NKAPQ8N5F7 415 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 METTL21AQ8WXB1 218 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 EGFL8Q99944 293 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 MACROD1Q9BQ69 325 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 FAM129AQ9BZQ8 928 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 WHRNQ9P202 907 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 MRPS2Q9Y399 296 aaKnown RBP18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 DYRK1BQ9Y463 629 aa18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.84■□□□□ 0.61
SHROOM1-204ENST00000440118 KCNE1BA0A087WTH5 132 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 E7ESA3 106 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 H0YIG0 161 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 PCDH17O14917 1159 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 FOXS1O43638 330 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 NSA2O95478 260 aaKnown RBP18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 BCL6P41182 706 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 GLRBP48167 497 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 ZNF460Q14592 562 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 LINC00696Q6ZRV3 163 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 NDUFAF7Q7L592 441 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 LAPTM4BQ86VI4 370 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 ZC3H7AQ8IWR0 971 aaKnown RBP18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 SPATA4Q8NEY3 305 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 SLC13A3Q8WWT9 602 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 FBXL8Q96CD0 374 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 ERP44Q9BS26 406 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 ZBTB20Q9HC78 741 aaPredicted RBP18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 RIC8BQ9NVN3 520 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 HCN3Q9P1Z3 774 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 UTP11Q9Y3A2 253 aaKnown RBP18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 RELNP78509 3460 aa18.83■□□□□ 0.6
SHROOM1-204ENST00000440118 FANCGO15287 622 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 NDUFS4O43181 175 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 RAD51CO43502 376 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 OR1F1O43749 312 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 AGFG2O95081 481 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 C8orf89P0DMQ9 161 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 COX6A1P12074 109 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 SKP1P63208 163 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 MEF2AQ02078 507 aaPredicted RBP18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 ILF2Q12905 390 aaKnown RBP18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 CSHL1Q14406 222 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 FHL5Q5TD97 284 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 ISLR2Q6UXK2 745 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 C17orf53Q8N3J3 647 aaPredicted RBP18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 CISD2Q8N5K1 135 aaKnown RBP18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 MFSD9Q8NBP5 474 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 OR56A3Q8NH54 315 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 PPP4R1Q8TF05 950 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 SLC5A11Q8WWX8 675 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 TSNARE1Q96NA8 513 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 MESP1Q9BRJ9 268 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 TGIF2Q9GZN2 237 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 RHOJQ9H4E5 214 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 GPAMQ9HCL2 828 aa18.82■□□□□ 0.6
SHROOM1-204ENST00000440118 MAST4O15021 2626 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SPTBN1Q01082 2364 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 USP9XQ93008 2570 aaPredicted RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SGK494L7N484 410 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 NPPBP16860 134 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 XCR1P46094 333 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 TAS2R39P59534 338 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 AP2B1P63010 937 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 ELOAQ14241 798 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 ATG9BQ674R7 924 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 TMEM214Q6NUQ4 689 aaKnown RBP18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SBSNQ6UWP8 590 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 SYT10Q6XYQ8 523 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 PRSS41Q7RTY9 318 aa18.81■□□□□ 0.6
SHROOM1-204ENST00000440118 ADAMTSL2Q86TH1 951 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms