RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ICMTO60725 284 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PEPDP12955 493 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACPPP15309 386 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 NAT1P18440 290 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 DGKAP23743 735 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 UQCRC1P31930 480 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PTGER3P43115 390 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 MAGEA11P43364 429 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TLE2Q04725 743 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TCTN1Q2MV58 587 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 LRRC66Q68CR7 880 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SERPINA13PQ6UXR4 307 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PROSER1Q86XN7 944 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 RGL4Q8IZJ4 473 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC38A6Q8IZM9 456 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 CLECL1Q8IZS7 167 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 RBFAQ8N0V3 343 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SLC34A3Q8N130 599 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SVOPQ8N4V2 548 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TEX26Q8N6G2 289 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR5AK3PQ8NH89 298 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 POF1BQ8WVV4 589 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ART5Q96L15 291 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 CLSTN3Q9BQT9 956 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 MRPL17Q9NRX2 175 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TAS2R9Q9NYW1 312 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ABCD2Q9UBJ2 740 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 IFT52Q9Y366 437 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 HSPB11Q9Y547 144 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 WASH4PA8MWX3 477 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 KIAA0513O60268 411 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 STK16O75716 305 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 AP2A2O94973 939 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 VNN2O95498 520 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EPOP01588 193 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ESR1P03372 595 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SERPIND1P05546 499 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 HOXC8P31273 242 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EIF2DP41214 584 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 CTSKP43235 329 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 GNPDA1P46926 289 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EEFSECP57772 596 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SYTL3Q4VX76 610 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PYDC2Q56P42 97 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 B3GLCTQ6Y288 498 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF517Q6ZMY9 492 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 C11orf96Q7Z7L8 435 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZBTB2Q8N680 514 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PDPRQ8NCN5 879 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EID2BQ96D98 161 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 OTUB1Q96FW1 271 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 CAPNS2Q96L46 248 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 COPS8Q99627 209 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ACOT13Q9NPJ3 140 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SAGE2PA6NJ88 616 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EVPLLA8MZ36 301 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 H3BN98 237 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 KPNA3O00505 521 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PCDHGA12O60330 932 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SERPINA4P29622 427 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SOAT1P35610 550 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 HNF4AP41235 474 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 DAPP51397 102 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SMSP52788 366 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SRP54P61011 504 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 VLDLRP98155 873 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 IRF8Q02556 426 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 EMX2Q04743 252 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 UGT8Q16880 541 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SETMARQ53H47 684 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TYW3Q6IPR3 259 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 BEND5Q7L4P6 421 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 SPATA19Q7Z5L4 167 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ALDH16A1Q8IZ83 802 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 TAGAPQ8N103 731 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR9Q1Q8NGQ5 310 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 ZNF461Q8TAF7 563 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PMEPA1Q969W9 287 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 OR5M11Q96RB7 305 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 DOK1Q99704 481 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 WRAP53Q9BUR4 548 aaKnown RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 IL1RAPQ9NPH3 570 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 KIAA1522Q9P206 1035 aaPredicted RBP9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 PCDHGB6Q9Y5F9 930 aa9.62□□□□□ -0.87
CDC42SE1-202ENST00000439374 IGLV3-10A0A075B6K4 115 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 H0YAE9 185 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 E2F3O00716 465 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 PTHP01270 115 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ANXA5P08758 320 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 PSKH1P11801 424 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 BPIP17213 487 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 GGT1P19440 569 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CXCR2P25025 360 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 CRATP43155 626 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 RAB8AP61006 207 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 NFKB2Q00653 900 aa9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 EIF4EBP2Q13542 120 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE1-202ENST00000439374 TRIM71Q2Q1W2 868 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms