RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LCN1P1Q5VSP4 162 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 BICRALQ6AI39 1079 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 NCEH1Q6PIU2 408 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 GDPD4Q6W3E5 623 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PRSS48Q7RTY5 328 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 VTCN1Q7Z7D3 282 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SLC43A3Q8NBI5 491 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 AQP11Q8NBQ7 271 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TBC1D15Q8TC07 691 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF675Q8TD23 568 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 OVCA2Q8WZ82 227 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 OR8D1Q8WZ84 308 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SLC30A2Q9BRI3 323 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DOHHQ9BU89 302 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 RIOK2Q9BVS4 552 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 OCEL1Q9H607 264 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 C3orf14Q9HBI5 128 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ITM2CQ9NQX7 267 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 USP22Q9UPT9 525 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF451Q9Y4E5 1061 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 C1QTNF3-AMACRE9PGA6 284 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PDPK1O15530 556 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CXCL14O95715 111 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PRG2P13727 222 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MYL9P24844 172 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SHMT2P34897 504 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PSMD8P48556 350 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CD97P48960 835 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZSWIM7Q19AV6 140 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PLA2G4EQ3MJ16 856 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RUNDC3AQ59EK9 446 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PLEKHS1Q5SXH7 462 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 C10orf62Q5T681 223 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 IRAK1BP1Q5VVH5 260 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GALNT10Q86SR1 603 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PTRH1Q86Y79 214 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 IFNL1Q8IU54 200 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 BEND7Q8N7W2 519 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 OR4K1Q8NGD4 311 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GTF2H4Q92759 462 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZBED6CLQ96FA7 236 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SH3YL1Q96HL8 342 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MYOCQ99972 504 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DPH2Q9BQC3 489 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM175Q9BSA9 504 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GPN2Q9H9Y4 310 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 FARSBQ9NSD9 589 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 B4GALT6Q9UBX8 382 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DPP7Q9UHL4 492 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ING4Q9UNL4 249 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PCDHB11Q9Y5F2 797 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CHST10O43529 356 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PSIP1O75475 530 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DHFRP00374 187 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 VIPP01282 170 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 H1F0P07305 194 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 MATN1P21941 496 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 OR1E2P47887 323 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DGKEP52429 567 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RPS13P62277 151 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KLHL12Q53G59 568 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KLHL22Q53GT1 634 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 LIPJQ5W064 366 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ARMC6Q6NXE6 501 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 BRAT1Q6PJG6 821 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TMEM207Q6UWW9 146 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 PLEKHG7Q6ZR37 379 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 Q6ZVU0 165 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZSWIM9Q86XI8 627 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CMTM8Q8IZV2 173 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 UBE2J2Q8N2K1 259 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TEX26Q8N6G2 289 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TRPV1Q8NER1 839 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 OR13F1Q8NGS4 319 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 BTN2A2Q8WVV5 523 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SLCO4A1Q96BD0 722 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 RHBDF1Q96CC6 855 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DUS3LQ96G46 650 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ALPK1Q96QP1 1244 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 UHRF1Q96T88 793 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 DSN1Q9H410 356 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 INTS6Q9UL03 887 aaKnown RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SPIN1Q9Y657 262 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KRBA1A5PL33 1030 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 C19orf67A6NJJ6 358 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CCRL2O00421 344 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 CA12O43570 354 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TPST2O60704 377 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GJB3O75712 270 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 C6orf47O95873 294 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GBAP04062 536 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 KLK1P06870 262 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 GALTP07902 379 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 JUPP14923 745 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 TLX1P31314 330 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SLC13A2Q13183 592 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 SELPLGQ14242 412 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF181Q2M3W8 571 aa6.47□□□□□ -1.37
CSDE1-205ENST00000438362 C5orf22Q49AR2 442 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms