RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 TICRRQ7Z2Z1 1910 aa9.15□□□□□ -0.95
CUX1-206ENST00000437600 GFYI3L273 518 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 FPGTO14772 594 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 TPPPO94811 219 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 STATHP02808 62 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 FCGR1AP12314 374 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 PTPN6P29350 595 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 ALDH3A2P51648 485 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 SEC13P55735 322 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 CLDN8P56748 225 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 ESRRGP62508 458 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 DAG1Q14118 895 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 ZNF852Q6ZMS4 543 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 OR8J3Q8NGG0 315 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 NEIL2Q969S2 332 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 SDCCAG3Q96C92 435 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 FAM83CQ9BQN1 747 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 OR51B5Q9H339 312 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 EPB41L1Q9H4G0 881 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 RDH14Q9HBH5 336 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 AMBNQ9NP70 447 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 RASSF1Q9NS23 344 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 FAM118AQ9NWS6 357 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 TRPS1Q9UHF7 1281 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 FBXO9Q9UK97 447 aaPredicted RBP9.14□□□□□ -0.95
CUX1-206ENST00000437600 PPIL1Q9Y3C6 166 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 CFAP54Q96N23 3096 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 KCNE1BA0A087WTH5 132 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 GABRR3A8MPY1 467 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 LATO43561 262 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 NFATC1O95644 943 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 DCTP40126 519 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 KIR3DL1P43629 444 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 OR1E2P47887 323 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 TFF2Q03403 129 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 BNIP3Q12983 259 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 DMC1Q14565 340 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 ZNF284Q2VY69 593 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 UAP1L1Q3KQV9 507 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 C9orf64Q5T6V5 341 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 LYPLAL1Q5VWZ2 237 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 EGFLAMQ63HQ2 1017 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 TRMT11Q7Z4G4 463 aaKnown RBP9.14□□□□□ -0.95
CUX1-206ENST00000437600 KIAA0907Q7Z7F0 614 aaPredicted RBP9.14□□□□□ -0.95
CUX1-206ENST00000437600 TMPRSS11BQ86T26 416 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 CYP4Z1Q86W10 505 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 OR52J3Q8NH60 311 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 OR5AK3PQ8NH89 298 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 KLK6Q92876 244 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 PKP4Q99569 1192 aa9.14□□□□□ -0.95
CUX1-206ENST00000437600 CDCA3Q99618 268 aaPredicted RBP9.14□□□□□ -0.95
CUX1-206ENST00000437600 DCAF13Q9NV06 445 aaKnown RBP9.14□□□□□ -0.95
CUX1-206ENST00000437600 TTC28Q96AY4 2481 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TMEM221A6NGB7 291 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 SPINT1O43278 529 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ASGR2P07307 311 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 CYP2A6P11509 494 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 CYP2A7P20853 494 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 FMO3P31513 532 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 GJA4P35212 333 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 MMP12P39900 470 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 SLC6A12P48065 614 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 CDK9P50750 372 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 EMP3P54852 163 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 VLDLRP98155 873 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 KLHL35Q6PF15 583 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TERB1Q8NA31 727 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HUS1BQ8NHY5 278 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 CLIP3Q96DZ5 547 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 UGT2B28Q9BY64 529 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 SPNS1Q9H2V7 528 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 TM7SF3Q9NS93 570 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 DZANK1Q9NVP4 752 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 VPS29Q9UBQ0 182 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 WARS2Q9UGM6 360 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 HCN2Q9UL51 889 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 CDH7Q9ULB5 785 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 PLXNB3Q9ULL4 1909 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HOXC11O43248 304 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 NUAK1O60285 661 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 RECQL5O94762 991 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 NPPAP01160 153 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ANXA4P09525 319 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 LAMP2P13473 410 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 GDI1P31150 447 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 RPS13P62277 151 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 CD47Q08722 323 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ACSM2AQ08AH3 577 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 MAD2L1Q13257 205 aaPredicted RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 FXNQ16595 210 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 HENMT1Q5T8I9 393 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 ACSM2BQ68CK6 577 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 RAET1GQ6H3X3 334 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ZDHHC21Q8IVQ6 265 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 ZC3H7AQ8IWR0 971 aaKnown RBP9.13□□□□□ -0.95
CUX1-206ENST00000437600 CHPFQ8IZ52 775 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 MBOAT4Q96T53 435 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 SLC6A17Q9H1V8 727 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 RIBC2Q9H4K1 309 aa9.13□□□□□ -0.95
CUX1-206ENST00000437600 GORASP2Q9H8Y8 452 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms