RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 SPATA24Q86W54 205 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ANKRD46Q86W74 232 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 PHACTR4Q8IZ21 702 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 CHTF18Q8WVB6 975 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 TCEAL2Q9H3H9 227 aaPredicted RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 USP22Q9UPT9 525 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 INVSQ9Y283 1065 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 HEATR5BQ9P2D3 2071 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ARHGEF17Q96PE2 2063 aaPredicted RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 FANCMQ8IYD8 2048 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ZNF839A8K0R7 811 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 AXIN1O15169 862 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 DFNA5O60443 496 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 PKLRP30613 574 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 MTPNP58546 118 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 LAPTM5Q13571 262 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 OGFRL1Q5TC84 451 aaPredicted RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ARMCX6Q7L4S7 300 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ANKRD53Q8N9V6 530 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 OR2A1Q8NGT9 310 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 CGREF1Q99674 301 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 MVB12BQ9H7P6 319 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 SLC6A13Q9NSD5 602 aa20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ZNF624Q9P2J8 865 aaPredicted RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 MRPS17Q9Y2R5 130 aaKnown RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.29■□□□□ 0.84
PTPRF-207ENST00000436724 IGHV1OR15-9A0A0B4J2B8 117 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 FOXE1O00358 373 aaPredicted RBP20.28■□□□□ 0.84
PTPRF-207ENST00000436724 TNFRSF10CO14798 259 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ACPPP15309 386 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 PEX19P40855 299 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 CCR5P51681 352 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 STARD6P59095 220 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 CYP4F2P78329 520 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 PWP1Q13610 501 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ANKRD26P1Q6NSI1 321 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ABRAXAS1Q6UWZ7 409 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 NRROSQ86YC3 692 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 PLD3Q8IV08 490 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 RAB42Q8N4Z0 105 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 OR7A2PQ8NGA2 310 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 WNT16Q9UBV4 365 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 KLF15Q9UIH9 416 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 IGKV1-8A0A0C4DH67 115 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 KCNH1O95259 989 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ANXA4P09525 319 aaPredicted RBP20.28■□□□□ 0.84
PTPRF-207ENST00000436724 S100A3P33764 101 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 LIPEQ05469 1076 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ZP2Q05996 745 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 GTDC1Q4AE62 458 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 PQLC1Q8N2U9 271 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 OR2L8Q8NGY9 312 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 ALG2Q9H553 416 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 WASH6PQ9NQA3 447 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 LRP4O75096 1905 aa20.28■□□□□ 0.84
PTPRF-207ENST00000436724 SNRNP200O75643 2136 aaKnown RBP20.27■□□□□ 0.84
PTPRF-207ENST00000436724 TBX6O95947 436 aaPredicted RBP20.27■□□□□ 0.84
PTPRF-207ENST00000436724 NPPAP01160 153 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 HSD17B1P14061 328 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 RABIFP47224 123 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 GSK3BP49841 420 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 UGT8Q16880 541 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 HKDC1Q2TB90 917 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 SPIN4Q56A73 249 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 OR4F3Q6IEY1 312 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 KRT78Q8N1N4 520 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 ABHD11Q8NFV4 315 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 TESCQ96BS2 214 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 PCBD2Q9H0N5 130 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 SPHK1Q9NYA1 384 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 SLC25A37Q9NYZ2 338 aa20.27■□□□□ 0.84
PTPRF-207ENST00000436724 C6orf203Q9P0P8 240 aaPredicted RBP20.27■□□□□ 0.84
PTPRF-207ENST00000436724 MYO15AQ9UKN7 3530 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 GNG14A0A1W2PPG7 69 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 MYO1DO94832 1006 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 OXTRP30559 389 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 CCR8P51685 355 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 MED21Q13503 144 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 COMMD6Q7Z4G1 85 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 ADCK2Q7Z695 626 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 ADHFE1Q8IWW8 467 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 MSRB3Q8IXL7 192 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 FAM9CQ8IZT9 166 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 WDR48Q8TAF3 677 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 ORAI3Q9BRQ5 295 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 INPP5KQ9BT40 448 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 SORBS1Q9BX66 1292 aaKnown RBP20.27■□□□□ 0.83
PTPRF-207ENST00000436724 SERHLQ9NQF3 203 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 BTBD3Q9Y2F9 522 aa20.27■□□□□ 0.83
PTPRF-207ENST00000436724 NUP214P35658 2090 aaPredicted RBP20.26■□□□□ 0.83
PTPRF-207ENST00000436724 ENO4A6NNW6 628 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PCDH7O60245 1069 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 THEGLP0DJG4 465 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PIM1P11309 404 aaPredicted RBP20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PRPS1L1P21108 318 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 ATP6V1B2P21281 511 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PEBP1P30086 187 aaKnown RBP20.26■□□□□ 0.83
PTPRF-207ENST00000436724 TIA1P31483 386 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PIK3CBP42338 1070 aa20.26■□□□□ 0.83
PTPRF-207ENST00000436724 PRDX1Q06830 199 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms