RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FABP3P05413 133 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ADRA2AP08913 450 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF30P17039 623 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ITGALP20701 1170 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ST8SIA6P61647 398 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RPL6Q02878 288 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM132BQ14DG7 1078 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CATSPERGQ6ZRH7 1159 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 KIF18BQ86Y91 864 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 GPR65Q8IYL9 337 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 LPCAT1Q8NF37 534 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 SPPL2AQ8TCT8 520 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 REPS1Q96D71 796 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 DCLRE1CQ96SD1 692 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 WACQ9BTA9 647 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 BRD7Q9NPI1 651 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RLIMQ9NVW2 624 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 FBXW11Q9UKB1 542 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 EVPLQ92817 2033 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ALPPP05187 535 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SYPP08247 313 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 KELP23276 732 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF157P51786 506 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SLC14A1Q13336 389 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SSX1Q16384 188 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 AANATQ16613 207 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.22□□□□□ -1.257e-8■■■□□ 19.2
CPSF6-202ENST00000435070 TIMM50Q3ZCQ8 353 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 OVOS1Q6IE37 1185 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PRSS42Q7Z5A4 293 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CEP76Q8TAP6 659 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 MRM3Q9HC36 420 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PRMT7Q9NVM4 692 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CLEC2DQ9UHP7 191 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF112Q9UJU3 913 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PCTPQ9UKL6 214 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 NDRG2Q9UN36 371 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GOLGA4Q13439 2230 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 MUSKO15146 869 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 DNAJB2P25686 324 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ETV6P41212 452 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GDF5P43026 501 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF81P51508 661 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GRIK2Q13002 908 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 C1orf94Q6P1W5 598 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ZSWIM9Q86XI8 627 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 DNAJC5GQ8N7S2 189 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ST8SIA4Q92187 359 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GTPBP3Q969Y2 492 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SIGLEC11Q96RL6 698 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM184CQ9NVA4 438 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 REV1Q9UBZ9 1251 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 VPS9D1Q9Y2B5 631 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 HSPE1-MOB4S4R3N1 261 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 HAS3O00219 553 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 NPPAP01160 153 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 NUP62P37198 522 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARF3P61204 181 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARF1P84077 181 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 NFKB2Q00653 900 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TEKQ02763 1124 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TNK1Q13470 666 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 FCN2Q15485 313 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 LCN1P1Q5VSP4 162 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 DNAJA4Q8WW22 397 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 HSH2DQ96JZ2 352 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CCDC115Q96NT0 180 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 KLHL21Q9UJP4 597 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARNTLO00327 626 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 OPN1SWP03999 348 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 S100A6P06703 90 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CTSHP09668 335 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PTPRAP18433 802 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CDKN2CP42773 168 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PER3P56645 1201 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 PSPHP78330 225 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SCRN3Q0VDG4 424 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CSTF3Q12996 717 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 LARS2Q15031 903 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 EIF2S3LQ2VIR3 472 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 LIPKQ5VXJ0 399 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARMC6Q6NXE6 501 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TEX261Q6UWH6 196 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 GPRIN1Q7Z2K8 1008 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 C9orf62Q8N4C0 152 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 OR4F6Q8NGB9 312 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ASB12Q8WXK4 309 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 FUBP1Q96AE4 644 aaKnown RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ACAD9Q9H845 621 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SCPEP1Q9HB40 452 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 TRAPPC4Q9Y296 219 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 U3KQ87 197 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 MGAMO43451 1857 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ISM1B1AKI9 464 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 INMT-MINDY4F8WBC2 141 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 KERAO60938 352 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 IFNA16P05015 189 aa7.22□□□□□ -1.25
CPSF6-202ENST00000435070 SLC2A2P11168 524 aaPredicted RBP7.22□□□□□ -1.25
CPSF6-202ENST00000435070 ARSBP15848 533 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms