RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 HSH2DQ96JZ2 352 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 TPT1P8Q9HAU6 139 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 CORO2BQ9UQ03 480 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ITM2BQ9Y287 266 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 HCFC2Q9Y5Z7 792 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 CHD7Q9P2D1 2997 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 A0A0J9YVX5 310 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 C1orf226A1L170 272 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 SLC9A3R1O14745 358 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 DNAJB5O75953 348 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ANXA4P09525 319 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 EPCAMP16422 314 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 TIA1P31483 386 aaKnown RBP eCLIP17.93■□□□□ 0.466e-7■■□□□ 13.4
CLK1-205ENST00000434813 DNAJA1P31689 397 aaKnown RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 VLDLRP98155 873 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 KEAP1Q14145 624 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 SF1Q15637 639 aaKnown RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 CPTPQ5TA50 214 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 KDM4DQ6B0I6 523 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 CAPN13Q6MZZ7 669 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 TMEM220Q6QAJ8 160 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 SLCO4C1Q6ZQN7 724 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 NLRP8Q86W28 1048 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 NPAS3Q8IXF0 933 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 TBC1D15Q8TC07 691 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 MUL1Q969V5 352 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 ZSWIM3Q96MP5 696 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 BARD1Q99728 777 aaKnown RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 DPH2Q9BQC3 489 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 GPN2Q9H9Y4 310 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 FAF1Q9UNN5 650 aaPredicted RBP17.93■□□□□ 0.46
CLK1-205ENST00000434813 KCNE2Q9Y6J6 123 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 AP1M2Q9Y6Q5 423 aa17.93■□□□□ 0.46
CLK1-205ENST00000434813 KLHL33A6NCF5 533 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 GABRR3A8MPY1 467 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 H3BM21 787 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 MITFO75030 526 aaPredicted RBP17.92■□□□□ 0.46
CLK1-205ENST00000434813 UGT2B11O75310 529 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 HNRNPA1P09651 372 aaKnown RBP eCLIP17.92■□□□□ 0.46
CLK1-205ENST00000434813 ITIH1P19827 911 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 PDHA2P29803 388 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 ITGA1P56199 1179 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 NTHL1P78549 312 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 RAPSNQ13702 412 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 BCL7AQ4VC05 210 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 ANXA8L1Q5VT79 327 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 PIWIL3Q7Z3Z3 882 aaKnown RBP17.92■□□□□ 0.46
CLK1-205ENST00000434813 VTCN1Q7Z7D3 282 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 GALNT10Q86SR1 603 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 VPS37AQ8NEZ2 397 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 FAM81AQ8TBF8 368 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 WFIKKN2Q8TEU8 576 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 NEIL2Q969S2 332 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 COQ8BQ96D53 544 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 REPS1Q96D71 796 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 CXorf40BQ96DE9 158 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 COQ10AQ96MF6 247 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 GULP1Q9UBP9 304 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 SNX5Q9Y5X3 404 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 HSPE1-MOB4S4R3N1 261 aa17.92■□□□□ 0.46
CLK1-205ENST00000434813 hCG_2039718K7EN88 272 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 M0QX08 132 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 C1orf105O95561 183 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 SOD1P00441 154 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CA3P07451 260 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CISD3P0C7P0 127 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CD247P20963 164 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 PBLDP30039 288 aaPredicted RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 WEE1P30291 646 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 DGKGP49619 791 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 DAPP51397 102 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 GALK1P51570 392 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 PLA2G16P53816 162 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 TBPL1P62380 186 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 LRRC74AQ0VAA2 488 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CAMK1Q14012 370 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 DHCR24Q15392 516 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 HKDC1Q2TB90 917 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 C10orf62Q5T681 223 aaPredicted RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 MED27Q6P2C8 311 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 GALNT18Q6P9A2 607 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 TMPRSS11BQ86T26 416 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 HORMAD1Q86X24 394 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 ZNF366Q8N895 744 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 WDR34Q96EX3 536 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 ASPSCR1Q9BZE9 553 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 PAK1IP1Q9NWT1 392 aaPredicted RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 BAG5Q9UL15 447 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 SPINT1O43278 529 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 DPM1O60762 260 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CYP17A1P05093 508 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 ABCB1P08183 1280 aaPredicted RBP17.91■□□□□ 0.46
CLK1-205ENST00000434813 IDSP22304 550 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 RGS19P49795 217 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 CDK5R2Q13319 367 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 GAB1Q13480 694 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 C16orf72Q14CZ0 275 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 GALNT5Q7Z7M9 940 aa17.91■□□□□ 0.46
CLK1-205ENST00000434813 BPIFB6Q8NFQ5 453 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms