RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 YIPF2Q9BWQ6 316 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ROPN1BQ9BZX4 212 aaPredicted RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 SPRY4Q9C004 299 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 CHST8Q9H2A9 424 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ROPN1Q9HAT0 212 aaPredicted RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 GPRC5BQ9NZH0 403 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 IFT80Q9P2H3 777 aaPredicted RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 DCDC2Q9UHG0 476 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 KCND3Q9UK17 655 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 RUVBL1Q9Y265 456 aaKnown RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 TNPO3Q9Y5L0 923 aaKnown RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 GSTA1P08263 222 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 PIM1P11309 404 aaPredicted RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 MTHFD2P13995 350 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 KRT4P19013 534 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 EEF1DP29692 281 aaKnown RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 CCT5P48643 541 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 DCDP81605 110 aaKnown RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 REEP5Q00765 189 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 RELAQ04206 551 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 RGS1Q08116 209 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 CHIT1Q13231 466 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 HIST2H2ACQ16777 129 aaPredicted RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 PAGE2BQ5JRK9 111 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 YOD1Q5VVQ6 348 aaPredicted RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 HIST2H2AA3Q6FI13 130 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 ASPGQ86U10 573 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 SRRM1Q8IYB3 904 aaKnown RBP14.81□□□□□ -0.04
TREX1-201ENST00000433541 KLHDC8AQ8IYD2 350 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 MFSD9Q8NBP5 474 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 ZNF740Q8NDX6 193 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 PPP4R1Q8TF05 950 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 UBTD2Q8WUN7 234 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 COL26A1Q96A83 441 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 ZBTB9Q96C00 473 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 RUFY1Q96T51 708 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 MACROD1Q9BQ69 325 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 TMEM216Q9P0N5 145 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 ASB1Q9Y576 335 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 PCDHGA4Q9Y5G9 962 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 MAU2Q9Y6X3 613 aa14.81□□□□□ -0.04
TREX1-201ENST00000433541 CCDC151A5D8V7 595 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 ANKDD1BA6NHY2 528 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 LRRC14BA6NHZ5 514 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 C21orf140B9A014 251 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 H3BMH7 237 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 RGS16O15492 202 aaPredicted RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 P2RX6O15547 441 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 EFSO43281 561 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 LCMT2O60294 686 aaKnown RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 SIX3O95343 332 aaPredicted RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 PRKAR1AP10644 381 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 RORAP35398 523 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 PIK3CGP48736 1102 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 VAC14Q08AM6 782 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 GTF2H2Q13888 395 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 RASA2Q15283 850 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 COL28A1Q2UY09 1125 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 NKAIN1Q4KMZ8 207 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 CEP85LQ5SZL2 805 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 ATG9BQ674R7 924 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 GTF2H2CQ6P1K8 395 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 SLCO4C1Q6ZQN7 724 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 MZB1Q8WU39 189 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 STARD8Q92502 1023 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 PTCD3Q96EY7 689 aaKnown RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 MMABQ96EY8 250 aaPredicted RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 ZNF285Q96NJ3 590 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 EFCAB11Q9BUY7 163 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 DRC3Q9H069 523 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 SPNS1Q9H2V7 528 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 ACTR8Q9H981 624 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 AKIRIN1Q9H9L7 192 aaPredicted RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 CDC14AQ9UNH5 594 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 PADI2Q9Y2J8 665 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 MRPS18BQ9Y676 258 aaKnown RBP14.8□□□□□ -0.04
TREX1-201ENST00000433541 EPG5Q9HCE0 2579 aa14.8□□□□□ -0.04
TREX1-201ENST00000433541 FITM1A5D6W6 292 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 ZNF891A8MT65 544 aaPredicted RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 PRPF4O43172 522 aaKnown RBP eCLIP14.79□□□□□ -0.04
TREX1-201ENST00000433541 PCNAP12004 261 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 DSPP15924 2871 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 FBLP22087 321 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 HNF4AP41235 474 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 OR1D4P47884 311 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 AVPR1BP47901 424 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 RPS18P62269 152 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 LAPTM5Q13571 262 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 DOC2AQ14183 400 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 RBBP7Q16576 425 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 PRTGQ2VWP7 1150 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 GARNL3Q5VVW2 1013 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 TMIGD1Q6UXZ0 262 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 GOLGA7Q7Z5G4 137 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 ENDOVQ8N8Q3 282 aaKnown RBP14.79□□□□□ -0.04
TREX1-201ENST00000433541 TRPV3Q8NET8 790 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 TTLQ8NG68 377 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 OR4K1Q8NGD4 311 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 GBP5Q96PP8 586 aa14.79□□□□□ -0.04
TREX1-201ENST00000433541 SMC6Q96SB8 1091 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms