RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 STX1BP61266 288 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 KLF10Q13118 480 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 KANSL1Q7Z3B3 1105 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 OOSP2Q86WS3 158 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 ZFAND4Q86XD8 727 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 TREML1Q86YW5 311 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 PARP9Q8IXQ6 854 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 FNDC5Q8NAU1 212 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 CMTM7Q96FZ5 175 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 MARK4Q96L34 752 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 OR2A14Q96R47 310 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 RHBGQ9H310 441 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 LRTM1Q9HBL6 345 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 SLC6A20Q9NP91 592 aa17.5■□□□□ 0.39
HMGN1-206ENST00000431390 GIMD1P0DJR0 217 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 POLR2CP19387 275 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 PRDX6P30041 224 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 GRK3P35626 688 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 MEF2AQ02078 507 aaPredicted RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 BIRC2Q13490 618 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 DDX39BQ13838 428 aaKnown RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 NAA25Q14CX7 972 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 SLC5A12Q1EHB4 618 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 HLA-BQ31612 363 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ZNF425Q6IV72 752 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 KLHL35Q6PF15 583 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ARL10Q8N8L6 244 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 KYQ8NBH2 561 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ZNF740Q8NDX6 193 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 OR10G6Q8NH81 332 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 NSL1Q96IY1 281 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 MTERF1Q99551 399 aaKnown RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 DPH7Q9BTV6 452 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 SARGQ9BW04 601 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TXLNGQ9NUQ3 528 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ARL8BQ9NVJ2 186 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 AIG1Q9NVV5 245 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 HRASLS2Q9NWW9 162 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ASIC5Q9NY37 505 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 NLGN3Q9NZ94 848 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 NOP53Q9NZM5 478 aaKnown RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ANKMY1Q9P2S6 941 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 VPS29Q9UBQ0 182 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 SNX7Q9UNH6 387 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 SLC12A4Q9UP95 1085 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TMED5Q9Y3A6 229 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 FAM208BQ5VWN6 2430 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TRBC2A0A5B9 178 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 GSAPA4D1B5 854 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 OR5K3A6NET4 321 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 MAGEB17A8MXT2 336 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 HNRNPCL1O60812 293 aaKnown RBP17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ACPPP15309 386 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 PCSK2P16519 638 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 UGT2B7P16662 529 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 CALB2P22676 271 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 GSTM2P28161 218 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TRIM61Q5EBN2 209 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 KIAA1614Q5VZ46 1190 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ADCK2Q7Z695 626 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TBC1D19Q8N5T2 526 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TTLQ8NG68 377 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 DUSP23Q9BVJ7 150 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TBC1D10AQ9BXI6 508 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 BRINP2Q9C0B6 783 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 DMRT3Q9NQL9 472 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 NMRK1Q9NWW6 199 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 TAGLN3Q9UI15 199 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 WASF3Q9UPY6 502 aa17.49■□□□□ 0.39
HMGN1-206ENST00000431390 ADAMTS9Q9P2N4 1935 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SEC22BO75396 215 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 UNC5CO95185 931 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 CBX6O95503 412 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 CER1O95813 267 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SYPP08247 313 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 T-ENOLP0DO92 83 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 PIK3R1P27986 724 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 RPL38P63173 70 aaKnown RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 HERC3Q15034 1050 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 KIAA0040Q15053 153 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 RBBP5Q15291 538 aaKnown RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 RFTN2Q52LD8 501 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 ARMC6Q6NXE6 501 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SPESP1Q6UW49 350 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 ZNF761Q86XN6 746 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 MIER2Q8N344 545 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 RNF175Q8N4F7 328 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SAP25Q8TEE9 199 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 CMTM5Q96DZ9 223 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SLC38A3Q99624 504 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 GAREM1Q9H706 876 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 SDR39U1Q9NRG7 319 aaPredicted RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 EIF3LQ9Y262 564 aaKnown RBP17.48■□□□□ 0.39
HMGN1-206ENST00000431390 KLK4Q9Y5K2 254 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 GPR45Q9Y5Y3 372 aa17.48■□□□□ 0.39
HMGN1-206ENST00000431390 ASCC3Q8N3C0 2202 aaKnown RBP17.47■□□□□ 0.39
HMGN1-206ENST00000431390 CEP295Q9C0D2 2601 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms