RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 G3V2T6 193 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 H3BSA7 217 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 EPN2O95208 641 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ALBP02768 609 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ANXA4P09525 319 aaPredicted RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 GJA4P35212 333 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 EIF2DP41214 584 aaKnown RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 TAS2R38P59533 333 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 RPA4Q13156 261 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 PDE7AQ13946 482 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF385BQ569K4 471 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ANKRD26P1Q6NSI1 321 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 CRTC3Q6UUV7 619 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 NXPE4Q6UWF7 544 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 B3GNT6Q6ZMB0 384 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 DSG4Q86SJ6 1040 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 PDZD3Q86UT5 571 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 HS3ST5Q8IZT8 346 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 TRIML2Q8N7C3 387 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 ST13P5Q8NFI4 369 aaPredicted RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 GOT1L1Q8NHS2 421 aaPredicted RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 CXorf40AQ8TE69 158 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SETD7Q8WTS6 366 aaKnown RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SUSD6Q92537 303 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 NCLNQ969V3 563 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SH3KBP1Q96B97 665 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SPATA9Q9BWV2 254 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 AMBRA1Q9C0C7 1298 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 GABARAPL1Q9H0R8 117 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 TOR3AQ9H497 397 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 SMURF2Q9HAU4 748 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 VNN3Q9NY84 501 aa13.44□□□□□ -0.26
HOXC4-202ENST00000430889 RNASET2O00584 256 aaKnown RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 PCDH7O60245 1069 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 SLC5A2P31639 672 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 RUNX3Q13761 415 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 AGERQ15109 404 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 HKDC1Q2TB90 917 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 CCNYL2Q5T2Q4 361 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 EGFLAMQ63HQ2 1017 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 ANKRD34AQ69YU3 496 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 LCTLQ6UWM7 567 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 GET4Q7L5D6 327 aaPredicted RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 VN1R5Q7Z5H4 357 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 ADHFE1Q8IWW8 467 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 ZFP90Q8TF47 636 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 SLC5A11Q8WWX8 675 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 MUS81Q96NY9 551 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 RBM4BQ9BQ04 359 aaKnown RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 RBM4Q9BWF3 364 aaKnown RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 PLA2G2FQ9BZM2 168 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 DYRK4Q9NR20 520 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 DZANK1Q9NVP4 752 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 TMEFF2Q9UIK5 374 aaPredicted RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 SAMD4AQ9UPU9 718 aaKnown RBP13.43□□□□□ -0.26
HOXC4-202ENST00000430889 DYRK1BQ9Y463 629 aa13.43□□□□□ -0.26
HOXC4-202ENST00000430889 TBC1D3BA6NDS4 549 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 KAT7O95251 611 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 KDELR2P33947 212 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 HPCAL1P37235 193 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 PIK3CBP42338 1070 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 HLCSP50747 726 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 CDK9P50750 372 aaKnown RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 MVDP53602 400 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 CRYBA2P53672 197 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 SH3BGRP55822 239 aaPredicted RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF763Q0D2J5 394 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 EPS8Q12929 822 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 GAB1Q13480 694 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 VEZF1Q14119 521 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 ZIK1Q3SY52 487 aaPredicted RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 IQCCQ4KMZ1 466 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 C2orf27AQ580R0 203 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 PAGE2BQ5JRK9 111 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 CPTPQ5TA50 214 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 ANXA8L1Q5VT79 327 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 AGBL4Q5VU57 503 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 ZCCHC8Q6NZY4 707 aaKnown RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 ZNF621Q6ZSS3 439 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 CBLL1Q75N03 491 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 COMMD6Q7Z4G1 85 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 TRMT11Q7Z4G4 463 aaKnown RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 FAM129CQ86XR2 697 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 METTL4Q8N3J2 472 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 MENTQ9BUN1 341 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 BHLHE41Q9C0J9 482 aaPredicted RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 LMAN2LQ9H0V9 348 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 TPT1P8Q9HAU6 139 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 VCX3AQ9NNX9 186 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 IL1RAPQ9NPH3 570 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 CCDC177Q9NQR7 707 aaPredicted RBP13.42□□□□□ -0.26
HOXC4-202ENST00000430889 FAM118AQ9NWS6 357 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 SLC23A2Q9UGH3 650 aa13.42□□□□□ -0.26
HOXC4-202ENST00000430889 TMEM98Q9Y2Y6 226 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms