RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RPRD1BQ9NQG5 326 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 OSER1Q9NX31 292 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ITGB1BP2Q9UKP3 347 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 LDOC1O95751 146 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 XRCC1P18887 633 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RAB15P59190 212 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RPS15AP62244 130 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 IKBIPQ70UQ0 350 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TEX26Q8N6G2 289 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ZMIZ2Q8NF64 920 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CLIP3Q96DZ5 547 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 KATNBL1Q9H079 304 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 PCDHAC1Q9H158 963 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SEC14L4Q9UDX3 406 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 FRMPD3Q5JV73 1810 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TRIM43BA6NCK2 446 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TTC34A8MYJ7 566 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 LIN52Q52LA3 116 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TTC9BQ8N6N2 239 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CRELD1Q96HD1 420 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SLC45A3Q96JT2 553 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 HEPACAM2A8MVW5 462 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TOP3BO95985 862 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF3P17036 446 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CD9P21926 228 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ADRA1AP35348 466 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 MVKQ03426 396 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CMPK2Q5EBM0 449 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 REEP3Q6NUK4 255 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 NAPRTQ6XQN6 538 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 PARGQ86W56 976 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 APCDD1Q8J025 514 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 FAM98AQ8NCA5 519 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 MAPK15Q8TD08 544 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 OR2M4Q96R27 311 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 S100A13Q99584 98 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SPRTNQ9H040 489 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CRISPLD1Q9H336 500 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 MAT2BQ9NZL9 334 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TAC3Q9UHF0 121 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 OAZ3Q9UMX2 235 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SLC30A4O14863 429 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 AGTR2P50052 363 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TAS2R50P59544 299 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RPS13P62277 151 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 VMP1Q96GC9 406 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 MYRFLQ96LU7 910 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 IGLV3-10A0A075B6K4 115 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 PAX7P23759 505 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 NUP62P37198 522 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ACTR1BP42025 376 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ACTR1AP61163 376 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 FAM189BP81408 668 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 KCTD11Q693B1 232 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CEACAM20Q6UY09 585 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 TMCO2Q7Z6W1 182 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 COMMD2Q86X83 199 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ABCG4Q9H172 646 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CNOT11Q9UKZ1 510 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 RPL36Q9Y3U8 105 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 E7ENX8 843 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SAP18O00422 153 aaKnown RBP11.18□□□□□ -0.62
PTCH1-208ENST00000430669 SDHDO14521 159 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CDH12P55289 794 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 ATP6AP1Q15904 470 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 EHD3Q9NZN3 535 aa11.18□□□□□ -0.62
PTCH1-208ENST00000430669 CCDC182A6NF36 153 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 C2orf74A8MZ97 194 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 PDYNP01213 254 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 DRD1P21728 446 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 NRG3P56975 720 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 OR4D1Q15615 310 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 PIGGQ5H8A4 983 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 DPPA4Q7L190 304 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 SLC22A1O15245 554 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 LDB2O43679 373 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 APBB3O95704 486 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ADRB3P13945 408 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 GLDCP23378 1020 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ZSWIM7Q19AV6 140 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 FLCNQ8NFG4 579 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 OSTF1Q92882 214 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ZDHHC12Q96GR4 267 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ACTL8Q9H568 366 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 PTGFRNQ9P2B2 879 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-208ENST00000430669 DNAJB5O75953 348 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ARHGAP19Q14CB8 494 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 UBXN2BQ14CS0 331 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ANKRD33Q7Z3H0 272 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 ARHGAP12Q8IWW6 846 aa11.17□□□□□ -0.62
PTCH1-208ENST00000430669 VANGL1Q8TAA9 524 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms