RNA–Protein interactions for RNA: ENST00000428634.1

PEX11B-202, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2

Gene PEX11B, Length 667 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-202ENST00000428634 RNF44Q7L0R7 432 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 CPLX4Q7Z7G2 160 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 PLD3Q8IV08 490 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 DDIASQ8IXT1 998 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 MFSD9Q8NBP5 474 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 TRPV3Q8NET8 790 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 KLHL6Q8WZ60 621 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
PEX11B-202ENST00000428634 CCDC74BQ96LY2 380 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 NLNQ9BYT8 704 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 SPNS1Q9H2V7 528 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 ZNF768Q9H5H4 540 aaKnown RBP11.59□□□□□ -0.55
PEX11B-202ENST00000428634 TNFRSF12AQ9NP84 129 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 NMRK1Q9NWW6 199 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 AKAP7Q9P0M2 348 aaPredicted RBP11.59□□□□□ -0.55
PEX11B-202ENST00000428634 ZFP69BQ9UJL9 534 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 ZNF490Q9ULM2 529 aaPredicted RBP11.59□□□□□ -0.55
PEX11B-202ENST00000428634 BTRCQ9Y297 605 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 DNAJC15Q9Y5T4 150 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 WDFY4Q6ZS81 3184 aa11.59□□□□□ -0.55
PEX11B-202ENST00000428634 ASXL3Q9C0F0 2248 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SERTM1A2A2V5 107 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 TMEM233B4DJY2 109 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SLC28A1O00337 649 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 FOXE1O00358 373 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 TXNDC9O14530 226 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 LCMT2O60294 686 aaKnown RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SRPX2O60687 465 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SHOX2O60902 331 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SKAP2O75563 359 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CLEC3AO75596 197 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SERPIND1P05546 499 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CEACAM1P13688 526 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 NELFEP18615 380 aaKnown RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CSTF2P33240 577 aaKnown RBP eCLIP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 BCL6P41182 706 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SEC24CP53992 1094 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 INHBCP55103 352 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 RGS1Q08116 209 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CSTF3Q12996 717 aaKnown RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 DDX39BQ13838 428 aaKnown RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 ZIC1Q15915 447 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 PDCD2Q16342 344 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 IMPG1Q17R60 797 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 FBXO42Q6P3S6 717 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CYB5D1Q6P9G0 228 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 ZNF574Q6ZN55 896 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 ARHGAP22Q7Z5H3 698 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 ASPGQ86U10 573 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 MCATQ8IVS2 390 aaKnown RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SLITRK4Q8IW52 837 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 D2HGDHQ8N465 521 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 DNAJC22Q8N4W6 341 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 GBP7Q8N8V2 638 aaPredicted RBP11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CAMKVQ8NCB2 501 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 ZNF740Q8NDX6 193 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 HUS1BQ8NHY5 278 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 WDR20Q8TBZ3 569 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 USP7Q93009 1102 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 SLC41A2Q96JW4 573 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 CENPKQ9BS16 269 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 STRADBQ9C0K7 418 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 EPN3Q9H201 632 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 RHBGQ9H310 441 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 BRF2Q9HAW0 419 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 FANCEQ9HB96 536 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 RIC8BQ9NVN3 520 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 PSD3Q9NYI0 1048 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 PILRAQ9UKJ1 303 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 PLCL2Q9UPR0 1127 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 PCDHGA4Q9Y5G9 962 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 USH1CQ9Y6N9 552 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 AP1M2Q9Y6Q5 423 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 RP1P56715 2156 aa11.58□□□□□ -0.56
PEX11B-202ENST00000428634 URADA6NGE7 173 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 PIP5K1BO14986 540 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 RGS14O43566 566 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 CTSVO60911 334 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 VPS4BO75351 444 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 PDYNP01213 254 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 SLC35G6P0C7Q6 338 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 FTH1P19P0C7X4 201 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 PTX3P26022 381 aaPredicted RBP11.57□□□□□ -0.56
PEX11B-202ENST00000428634 CCKBRP32239 447 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 HTR6P50406 440 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 NOVA1P51513 510 aaKnown RBP11.57□□□□□ -0.56
PEX11B-202ENST00000428634 NEK2P51955 445 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 SIM1P81133 766 aaPredicted RBP11.57□□□□□ -0.56
PEX11B-202ENST00000428634 ACY1Q03154 408 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 BTKQ06187 659 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 ZFP36L1Q07352 338 aaKnown RBP11.57□□□□□ -0.56
PEX11B-202ENST00000428634 PWP1Q13610 501 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 ABRAXAS2Q15018 415 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 TCTE1Q5JU00 501 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 TCHHL1Q5QJ38 904 aaPredicted RBP11.57□□□□□ -0.56
PEX11B-202ENST00000428634 CHSY3Q70JA7 882 aa11.57□□□□□ -0.56
PEX11B-202ENST00000428634 TMPRSS9Q7Z410 1059 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms