RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 LIPJQ5W064 366 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 TLDC1Q6P9B6 456 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 TMIGD1Q6UXZ0 262 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 MYLK4Q86YV6 388 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 MGARPQ8TDB4 240 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 UBE2E3Q969T4 207 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 PMEPA1Q969W9 287 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF285Q96NJ3 590 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 PAIP2Q9BPZ3 127 aaKnown RBP12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 MECRQ9BV79 373 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 NTMT1Q9BV86 223 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 GATA5Q9BWX5 397 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 B3GNT4Q9C0J1 378 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 PITHD1Q9GZP4 211 aaPredicted RBP12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 DRC3Q9H069 523 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 GSTO2Q9H4Y5 243 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 NT5DC2Q9H857 520 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 STK38LQ9Y2H1 464 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 RNF11Q9Y3C5 154 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
CCHCR1-205ENST00000428174 SPTBP11277 2137 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 C9orf172C9J069 976 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 PPP6CO00743 305 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 TXNDC9O14530 226 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 NVLO15381 856 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 BIRC5O15392 142 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 BRINP1O60477 761 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 SCRG1O75711 98 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 NEFHP12036 1026 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 AHRP35869 848 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 LCP2Q13094 533 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 GRM7Q14831 915 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 HSP90B2PQ58FF3 399 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 GRHL2Q6ISB3 625 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 PWWP2BQ6NUJ5 590 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 MED27Q6P2C8 311 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 ASPGQ86U10 573 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 TMEM126BQ8IUX1 230 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF655Q8N720 491 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 CSNK1A1LQ8N752 337 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 L3MBTL4Q8NA19 623 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 TTC29Q8NA56 475 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 CAMKVQ8NCB2 501 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 TTLQ8NG68 377 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 OR4F6Q8NGB9 312 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 OR52B6Q8NGF0 335 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 MAGEB10Q96LZ2 347 aaPredicted RBP12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 CDK15Q96Q40 435 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF382Q96SR6 550 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 NLNQ9BYT8 704 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 SLC7A5P2Q9GIP4 190 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 SYNPO2LQ9H987 977 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 PRM3Q9NNZ6 103 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 STARD5Q9NSY2 213 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 ZFP69BQ9UJL9 534 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 PCDHGA7Q9Y5G6 932 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 AP1M2Q9Y6Q5 423 aa12.29□□□□□ -0.44
CCHCR1-205ENST00000428174 ANKDD1BA6NHY2 528 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 H3BMH7 237 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ZSCAN9O15535 394 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF749O43361 778 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 TIAF1O95411 115 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 STATHP02808 62 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 SERPIND1P05546 499 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 SLC5A2P31639 672 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 PKNOX1P55347 436 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 WDR4P57081 412 aaKnown RBP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 CYP4F2P78329 520 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 GPS2Q13227 327 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 CPSF6Q16630 551 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 PRTGQ2VWP7 1150 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 PRAMEF17Q5VTA0 474 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ZCCHC23Q6ZST2 131 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 FRMD7Q6ZUT3 714 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 GPRIN3Q6ZVF9 776 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ANKRD53Q8N9V6 530 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 TRPV3Q8NET8 790 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 SLC13A3Q8WWT9 602 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 RNF31Q96EP0 1072 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 CNDP1Q96KN2 507 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF578Q96N58 590 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 NDC1Q9BTX1 674 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 TRMOQ9BU70 441 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ACTR5Q9H9F9 607 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ASCL3Q9NQ33 180 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ENAMQ9NRM1 1142 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 THSD1Q9NS62 852 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 FOXJ2Q9P0K8 574 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 ZNF490Q9ULM2 529 aaPredicted RBP12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 PCDHB3Q9Y5E6 796 aa12.28□□□□□ -0.44
CCHCR1-205ENST00000428174 PCDHGA11Q9Y5H2 935 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms