RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 OR4D1Q15615 310 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 C18orf21Q32NC0 220 aaPredicted RBP17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 VWA2Q5GFL6 755 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 DCAF10Q5QP82 559 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 TMEM214Q6NUQ4 689 aaKnown RBP17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 SHISA6Q6ZSJ9 500 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 CMC1Q7Z7K0 106 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 CEP112Q8N8E3 955 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 CAMKVQ8NCB2 501 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 IFT81Q8WYA0 676 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 EGFL8Q99944 293 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 SLC25A23Q9BV35 468 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 DRC3Q9H069 523 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 ACSS3Q9H6R3 686 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 HS3ST3B1Q9Y662 390 aa17.01■□□□□ 0.31
IGHV3-47-201ENST00000425060 A0A0A6YYC8 382 aaPredicted RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 TRBC2A0A5B9 178 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 I3L1I5 382 aaPredicted RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 AGPSO00116 658 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 TAPBPO15533 448 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 SLC28A2O43868 658 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 GRK3P35626 688 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 GGT5P36269 586 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 SOX8P57073 446 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 OCA2Q04671 838 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 KLC1Q07866 573 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 CSHL1Q14406 222 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 NDUFA9Q16795 377 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 CDKL4Q5MAI5 379 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 KIRREL2Q6UWL6 708 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 ASB18Q6ZVZ8 466 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 FRA10AC1Q70Z53 315 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 ASPGQ86U10 573 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 LAPTM4BQ86VI4 370 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 KCT2Q8NC54 265 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 ZNF740Q8NDX6 193 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 FDCSPQ8NFU4 85 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 SLC13A3Q8WWT9 602 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 KIAA1191Q96A73 305 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 MIEF2Q96C03 454 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 MMABQ96EY8 250 aaPredicted RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 FER1L6-AS2Q96M78 137 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 CYTH2Q99418 400 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 FMO2Q99518 471 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 TGIF2Q9GZN2 237 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 TSPYL1Q9H0U9 437 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 CDC42EP4Q9H3Q1 356 aaKnown RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 PELI2Q9HAT8 420 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 SEMA3GQ9NS98 782 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 ANAPC2Q9UJX6 822 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 MAP4K5Q9Y4K4 846 aa17■□□□□ 0.31
IGHV3-47-201ENST00000425060 HEMK1Q9Y5R4 338 aaPredicted RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 HELZ2Q9BYK8 2649 aaKnown RBP17■□□□□ 0.31
IGHV3-47-201ENST00000425060 H0YIG0 161 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 MASP2O00187 686 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 PEX12O00623 359 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 PRPF4O43172 522 aaKnown RBP eCLIP16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 NSA2O95478 260 aaKnown RBP16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 IGHEP01854 428 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 CRABP2P29373 138 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 GDF5P43026 501 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 SCTRP47872 440 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 REEP5Q00765 189 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 NXPE4Q6UWF7 544 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 PRSS41Q7RTY9 318 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 ISCA2Q86U28 154 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 GPSM1Q86YR5 675 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 SHISA5Q8N114 240 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 TSNARE1Q96NA8 513 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 TMEM79Q9BSE2 394 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 NUDT9Q9BW91 350 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 MKKSQ9NPJ1 570 aaPredicted RBP16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 IGSF5Q9NSI5 407 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 TRPC4Q9UBN4 977 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 DYRK1BQ9Y463 629 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 PCDHGB7Q9Y5F8 929 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 KCNE2Q9Y6J6 123 aa16.99■□□□□ 0.31
IGHV3-47-201ENST00000425060 NCF1BA6NI72 391 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 NCF1CA8MVU1 366 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 FFAR3O14843 346 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 GPR42O15529 346 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 OR1F1O43749 312 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 NCF1P14598 390 aaPredicted RBP16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 PHBP35232 272 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 KLRB1Q12918 225 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 SLMAPQ14BN4 828 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 SYT16Q17RD7 645 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 ATG9BQ674R7 924 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 ATG14Q6ZNE5 492 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 PRICKLE2Q7Z3G6 844 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 TCAIMQ8N3R3 496 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 AFAP1L2Q8N4X5 818 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 ANKRD53Q8N9V6 530 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 PDPRQ8NCN5 879 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 OR9A4Q8NGU2 314 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 MOCOSQ96EN8 888 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
IGHV3-47-201ENST00000425060 CRB3Q9BUF7 120 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms