RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 A0A1B0GX78 115 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 FEZF1A0PJY2 475 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 STX16-NPEPL1H3BU86 382 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 K7EPI3 171 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 STX16O14662 325 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 P2RX6O15547 441 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 WFS1O76024 890 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 TCN2P20062 427 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 GRK3P35626 688 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 AHRP35869 848 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 SCTRP47872 440 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 TMPRSS3P57727 454 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 VAC14Q08AM6 782 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 TBCCQ15814 346 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 PDK4Q16654 411 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 PFKFB4Q16877 469 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 HKDC1Q2TB90 917 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 FAM198BQ6UWH4 519 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 CSNK1A1LQ8N752 337 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 ANKRD53Q8N9V6 530 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 EXT2Q93063 718 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 RERGQ96A58 199 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-205ENST00000423941 AIF1LQ9BQI0 150 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 NLNQ9BYT8 704 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 GPN2Q9H9Y4 310 aaPredicted RBP17.6■□□□□ 0.41
HDAC6-205ENST00000423941 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
HDAC6-205ENST00000423941 PLAAQ9Y263 795 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 TNPO3Q9Y5L0 923 aaKnown RBP17.6■□□□□ 0.41
HDAC6-205ENST00000423941 NBEAQ8NFP9 2946 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 MGAQ8IWI9 3026 aa17.6■□□□□ 0.41
HDAC6-205ENST00000423941 CCDC151A5D8V7 595 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 GOLGA8RI6L899 631 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 TK2O00142 265 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 E2F3O00716 465 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 CCNT2O60583 730 aaKnown RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 EIF2S1P05198 315 aaKnown RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 CD22P20273 847 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 DLSTP36957 453 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 DCDP81605 110 aaKnown RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 MEF2AQ02078 507 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 DNASE1L3Q13609 305 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 FAM53BQ14153 422 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 MUM1Q2TAK8 710 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 CCDC81Q6ZN84 652 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 TMPRSS11BQ86T26 416 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 TTC29Q8NA56 475 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 MR1Q95460 341 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 KIAA1143Q96AT1 154 aaPredicted RBP17.59■□□□□ 0.41
HDAC6-205ENST00000423941 MVB12AQ96EY5 273 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 C1QTNF3Q9BXJ4 246 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 CPNE5Q9HCH3 593 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 TXLNGQ9NUQ3 528 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 OPTCQ9UBM4 332 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 ZFP69BQ9UJL9 534 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 KCND3Q9UK17 655 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 EMCNQ9ULC0 261 aa17.59■□□□□ 0.41
HDAC6-205ENST00000423941 LRRC14BA6NHZ5 514 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 CLGNO14967 610 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 FOXS1O43638 330 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 OR1F1O43749 312 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 GFAPP14136 432 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 KRT15P19012 456 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 AGXTP21549 392 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 VARSP26640 1264 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 CRHR1P34998 444 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 SNRPNP63162 240 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 NFKB2Q00653 900 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 PWP1Q13610 501 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 DOC2AQ14183 400 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 NKAIN1Q4KMZ8 207 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 TMEM214Q6NUQ4 689 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 MRPL14Q6P1L8 145 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 PRMT9Q6P2P2 845 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 TTLL10Q6ZVT0 673 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 TRABD2AQ86V40 505 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 CAMKVQ8NCB2 501 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 NT5CQ8TCD5 201 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 SLC13A3Q8WWT9 602 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 PTCD3Q96EY7 689 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 CRELD1Q96HD1 420 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 SEC16BQ96JE7 1060 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 SCYL1Q96KG9 808 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 RUFY1Q96T51 708 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 SLC7A5P2Q9GIP4 190 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 MKS1Q9NXB0 559 aa17.58■□□□□ 0.4
HDAC6-205ENST00000423941 CPSF2Q9P2I0 782 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 ZNF490Q9ULM2 529 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 FARSAQ9Y285 508 aaKnown RBP17.58■□□□□ 0.4
HDAC6-205ENST00000423941 TLDC2A0PJX2 215 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 SMIM23A6NLE4 172 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 CTIFO43310 598 aaKnown RBP17.57■□□□□ 0.4
HDAC6-205ENST00000423941 GLRA3O75311 464 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 H2AFYO75367 372 aaKnown RBP17.57■□□□□ 0.4
HDAC6-205ENST00000423941 KLF7O75840 302 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-205ENST00000423941 SIX3O95343 332 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-205ENST00000423941 ALBP02768 609 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 EPB42P16452 691 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 CXCR2P25025 360 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 GSTM2P28161 218 aa17.57■□□□□ 0.4
HDAC6-205ENST00000423941 PTPN4P29074 926 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms