RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RAD51BO15315 384 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PEX1O43933 1283 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 TRIM13O60858 407 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C22orf31O95567 290 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 LINGO3P0C6S8 592 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C7P10643 843 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 IFNGR1P15260 489 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CPN2P22792 545 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 DCTP40126 519 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 MAGEA2P43356 314 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CLCNKAP51800 687 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EMP3P54852 163 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 XIAPP98170 497 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 POU5F1Q01860 360 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 MALLQ13021 153 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 SSPNQ14714 243 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 DECR1Q16698 335 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 NDUFA5Q16718 116 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C10orf62Q5T681 223 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 BICRALQ6AI39 1079 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PAPD4Q6PIY7 484 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 KDELC1Q6UW63 502 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C4orf22Q6V702 233 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 Q6ZVU0 165 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PDSS2Q86YH6 399 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C1orf87Q8N0U7 546 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 FITM2Q8N6M3 262 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF610Q8N9Z0 462 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 OR8K1Q8NGG5 319 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ALG3Q92685 438 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 LRRC39Q96DD0 335 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 OR1F2PQ96R84 312 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CGREF1Q99674 301 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 GAL3ST1Q99999 423 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 DUSP16Q9BY84 665 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 TRIM55Q9BYV6 548 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 SMOC2Q9H3U7 446 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 SLC52A3Q9NQ40 469 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 WASF3Q9UPY6 502 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 MGAT4BQ9UQ53 548 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 YARS2Q9Y2Z4 477 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PCDH15Q96QU1 1955 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CHD6Q8TD26 2715 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 hCG_1807616A0A1W2PRN6 198 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 TRIM64BA6NI03 449 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PYCARD-AS1I3L0S3 204 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 HAS3O00219 553 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PPIHO43447 177 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 MED24O75448 989 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 SERPINI2O75830 405 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 KNG1P01042 644 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C8orf89P0DMQ9 161 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 NMT1P30419 496 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 TMPRSS15P98073 1019 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 POU4F1Q01851 419 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CHRNEQ04844 493 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 STX5Q13190 355 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 RFTN1Q14699 578 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 HP1BP3Q5SSJ5 553 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EGFLAMQ63HQ2 1017 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CWF19L1Q69YN2 538 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C8orf74Q6P047 294 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 C11orf88Q6PI97 169 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 BRICD5Q6PL45 260 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CCNI2Q6ZMN8 369 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 BEND5Q7L4P6 421 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 RASSF3Q86WH2 238 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 CYP4Z2PQ8N1L4 340 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ZCCHC7Q8N3Z6 543 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EMC1Q8N766 993 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 NECAB1Q8N987 351 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 GJC3Q8NFK1 279 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 STEAP2Q8NFT2 490 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ETNPPLQ8TBG4 499 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 RIOK2Q9BVS4 552 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EIF2AQ9BY44 585 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 DEFB127Q9H1M4 99 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 GBA3Q9H227 469 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 VCX3BQ9H321 246 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 VCX3AQ9NNX9 186 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PARPBPQ9NWS1 579 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PAQR5Q9NXK6 330 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 XPR1Q9UBH6 696 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 KCNE2Q9Y6J6 123 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 DGKBQ9Y6T7 804 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 FAM186AA6NE01 2351 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 GLYATL1P3A0A0U1RQE8 302 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 SYCE1LA8MT33 242 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EBAG9O00559 213 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ZNF208O43345 1280 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ANGPTL1O95841 491 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 H2AFZP0C0S5 128 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 WARSP23381 471 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 NUP62P37198 522 aaPredicted RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 RPL3P39023 403 aaKnown RBP3.42□□□□□ -1.86
TOP2A-201ENST00000423485 ADCY8P40145 1251 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 LIMS1P48059 325 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 NUMBP49757 651 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 EFNA3P52797 238 aa3.42□□□□□ -1.86
TOP2A-201ENST00000423485 PMS1P54277 932 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms