RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CSHL1Q14406 222 aa8.81□□□□□ -1
NUP50-206ENST00000422489 PHKG1Q16816 387 aa8.81□□□□□ -1
NUP50-206ENST00000422489 MINDY4Q4G0A6 757 aa8.81□□□□□ -1
NUP50-206ENST00000422489 DUPD1Q68J44 220 aa8.81□□□□□ -1
NUP50-206ENST00000422489 LCTLQ6UWM7 567 aa8.81□□□□□ -1
NUP50-206ENST00000422489 CLEC18BQ6UXF7 455 aa8.81□□□□□ -1
NUP50-206ENST00000422489 Q6ZS92 163 aa8.81□□□□□ -1
NUP50-206ENST00000422489 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
NUP50-206ENST00000422489 STRA8Q7Z7C7 330 aa8.81□□□□□ -1
NUP50-206ENST00000422489 ASPGQ86U10 573 aa8.81□□□□□ -1
NUP50-206ENST00000422489 SLC26A11Q86WA9 606 aa8.81□□□□□ -1
NUP50-206ENST00000422489 CNTN4Q8IWV2 1026 aa8.81□□□□□ -1
NUP50-206ENST00000422489 SIRT6Q8N6T7 355 aa8.81□□□□□ -1
NUP50-206ENST00000422489 AMER2Q8N7J2 671 aa8.81□□□□□ -1
NUP50-206ENST00000422489 AMER3Q8N944 861 aa8.81□□□□□ -1
NUP50-206ENST00000422489 CLEC18CQ8NCF0 446 aa8.81□□□□□ -1
NUP50-206ENST00000422489 OR1N1Q8NGS0 311 aa8.81□□□□□ -1
NUP50-206ENST00000422489 ATL1Q8WXF7 558 aa8.81□□□□□ -1
NUP50-206ENST00000422489 LRRC39Q96DD0 335 aa8.81□□□□□ -1
NUP50-206ENST00000422489 THAP11Q96EK4 314 aa8.81□□□□□ -1
NUP50-206ENST00000422489 MAGEB10Q96LZ2 347 aaPredicted RBP8.81□□□□□ -1
NUP50-206ENST00000422489 LMF1Q96S06 567 aa8.81□□□□□ -1
NUP50-206ENST00000422489 OLFM1Q99784 485 aa8.81□□□□□ -1
NUP50-206ENST00000422489 HAUS8Q9BT25 410 aa8.81□□□□□ -1
NUP50-206ENST00000422489 PLAC1Q9HBJ0 212 aa8.81□□□□□ -1
NUP50-206ENST00000422489 ANKHQ9HCJ1 492 aa8.81□□□□□ -1
NUP50-206ENST00000422489 AGPAT4Q9NRZ5 378 aa8.81□□□□□ -1
NUP50-206ENST00000422489 C14orf105Q9NVL8 296 aa8.81□□□□□ -1
NUP50-206ENST00000422489 SH2B3Q9UQQ2 575 aa8.81□□□□□ -1
NUP50-206ENST00000422489 TEX264Q9Y6I9 313 aa8.81□□□□□ -1
NUP50-206ENST00000422489 PCSK5Q92824 1860 aa8.81□□□□□ -1
NUP50-206ENST00000422489 SPTA1P02549 2419 aa8.8□□□□□ -1
NUP50-206ENST00000422489 IGLV3-12A0A075B6K2 115 aa8.8□□□□□ -1
NUP50-206ENST00000422489 OR2W5A6NFC9 320 aa8.8□□□□□ -1
NUP50-206ENST00000422489 H0YIG0 161 aa8.8□□□□□ -1
NUP50-206ENST00000422489 SEC31AO94979 1220 aaKnown RBP8.8□□□□□ -1
NUP50-206ENST00000422489 BMP10O95393 424 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CBX6O95503 412 aa8.8□□□□□ -1
NUP50-206ENST00000422489 SERPINA7P05543 415 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CELA2AP08217 269 aa8.8□□□□□ -1
NUP50-206ENST00000422489 PRR35P0CG20 571 aa8.8□□□□□ -1
NUP50-206ENST00000422489 C8orf89P0DMQ9 161 aa8.8□□□□□ -1
NUP50-206ENST00000422489 COX6A1P12074 109 aa8.8□□□□□ -1
NUP50-206ENST00000422489 IL1RNP18510 177 aa8.8□□□□□ -1
NUP50-206ENST00000422489 FDXRP22570 491 aa8.8□□□□□ -1
NUP50-206ENST00000422489 BCL6P41182 706 aa8.8□□□□□ -1
NUP50-206ENST00000422489 HNF4AP41235 474 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CCR8P51685 355 aa8.8□□□□□ -1
NUP50-206ENST00000422489 SLC12A2P55011 1212 aa8.8□□□□□ -1
NUP50-206ENST00000422489 MFAP5Q13361 173 aa8.8□□□□□ -1
NUP50-206ENST00000422489 FAM53BQ14153 422 aa8.8□□□□□ -1
NUP50-206ENST00000422489 ZNF169Q14929 603 aaPredicted RBP8.8□□□□□ -1
NUP50-206ENST00000422489 TLR1Q15399 786 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CRB2Q5IJ48 1285 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CATSPEREQ5SY80 951 aa8.8□□□□□ -1
NUP50-206ENST00000422489 PRSS41Q7RTY9 318 aa8.8□□□□□ -1
NUP50-206ENST00000422489 VN1R4Q7Z5H5 301 aa8.8□□□□□ -1
NUP50-206ENST00000422489 ZC3H7AQ8IWR0 971 aaKnown RBP8.8□□□□□ -1
NUP50-206ENST00000422489 ZBED8Q8IZ13 594 aa8.8□□□□□ -1
NUP50-206ENST00000422489 SHISA5Q8N114 240 aa8.8□□□□□ -1
NUP50-206ENST00000422489 NKAPQ8N5F7 415 aaKnown RBP8.8□□□□□ -1
NUP50-206ENST00000422489 TBC1D19Q8N5T2 526 aa8.8□□□□□ -1
NUP50-206ENST00000422489 MFSD9Q8NBP5 474 aa8.8□□□□□ -1
NUP50-206ENST00000422489 KCT2Q8NC54 265 aa8.8□□□□□ -1
NUP50-206ENST00000422489 OR51Q1Q8NH59 317 aa8.8□□□□□ -1
NUP50-206ENST00000422489 BRIX1Q8TDN6 353 aaKnown RBP8.8□□□□□ -1
NUP50-206ENST00000422489 PPP4R1Q8TF05 950 aa8.8□□□□□ -1
NUP50-206ENST00000422489 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CYTH2Q99418 400 aa8.8□□□□□ -1
NUP50-206ENST00000422489 EGFL8Q99944 293 aa8.8□□□□□ -1
NUP50-206ENST00000422489 SGPP1Q9BX95 441 aa8.8□□□□□ -1
NUP50-206ENST00000422489 TGIF2Q9GZN2 237 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.8□□□□□ -1
NUP50-206ENST00000422489 DPH5Q9H2P9 285 aa8.8□□□□□ -1
NUP50-206ENST00000422489 RNF14Q9UBS8 474 aa8.8□□□□□ -1
NUP50-206ENST00000422489 CORO1CQ9ULV4 474 aaPredicted RBP8.8□□□□□ -1
NUP50-206ENST00000422489 NOVA2Q9UNW9 492 aaKnown RBP8.8□□□□□ -1
NUP50-206ENST00000422489 NTNG1Q9Y2I2 539 aa8.8□□□□□ -1
NUP50-206ENST00000422489 NAALAD2Q9Y3Q0 740 aa8.8□□□□□ -1
NUP50-206ENST00000422489 DYRK1BQ9Y463 629 aa8.8□□□□□ -1
NUP50-206ENST00000422489 PCDHGA10Q9Y5H3 936 aa8.8□□□□□ -1
NUP50-206ENST00000422489 ASH1LQ9NR48 2969 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 IGHV1-45A0A0A0MS14 117 aa8.79□□□□□ -1
NUP50-206ENST00000422489 IGHV3-20A0A0C4DH32 117 aa8.79□□□□□ -1
NUP50-206ENST00000422489 FAM95CA0A1B0GW59 222 aa8.79□□□□□ -1
NUP50-206ENST00000422489 DYTNA2CJ06 578 aa8.79□□□□□ -1
NUP50-206ENST00000422489 ANKUB1A6NFN9 424 aa8.79□□□□□ -1
NUP50-206ENST00000422489 ZNF860A6NHJ4 632 aa8.79□□□□□ -1
NUP50-206ENST00000422489 CDC7O00311 574 aa8.79□□□□□ -1
NUP50-206ENST00000422489 PIAS1O75925 651 aa8.79□□□□□ -1
NUP50-206ENST00000422489 SEC24DO94855 1032 aaPredicted RBP8.79□□□□□ -1
NUP50-206ENST00000422489 NSA2O95478 260 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 TSPAN12O95859 305 aa8.79□□□□□ -1
NUP50-206ENST00000422489 ICAM2P13598 275 aa8.79□□□□□ -1
NUP50-206ENST00000422489 XCR1P46094 333 aa8.79□□□□□ -1
NUP50-206ENST00000422489 RPL21P46778 160 aaKnown RBP8.79□□□□□ -1
NUP50-206ENST00000422489 AP1S2P56377 157 aa8.79□□□□□ -1
NUP50-206ENST00000422489 TAS2R39P59534 338 aa8.79□□□□□ -1
NUP50-206ENST00000422489 ACTN3Q08043 901 aaPredicted RBP8.79□□□□□ -1
NUP50-206ENST00000422489 CALCOCO2Q13137 446 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms