RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 AMACRQ9UHK6 382 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 VPS51Q9UID3 782 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 NAALADL1Q9UQQ1 740 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 WBP11Q9Y2W2 641 aaKnown RBP5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 NFS1Q9Y697 457 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 MAD1L1Q9Y6D9 718 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 CITO14578 2027 aa5.33□□□□□ -1.56
ECHDC1-206ENST00000417628 SH3D21A4FU49 640 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 KPNA7A9QM74 516 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 LMO7DNF2Z398 122 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 F8VP50 259 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SLCO1B7G3V0H7 640 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PSMD9O00233 223 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ETV2O00321 342 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 E2F3O00716 465 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MAPK13O15264 365 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC31A1O15431 190 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SLC7A4O43246 635 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PLRG1O43660 514 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CCDC22O60826 627 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 DCTN3O75935 186 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ATP5BP06576 529 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CYP21A2P08686 494 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 DLDP09622 509 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 NUDT17P0C025 328 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SMIM18P0DKX4 95 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 KRT5P13647 590 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 HPGDP15428 266 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 HNRNPA2B1P22626 353 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TCEA1P23193 301 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CXCR2P25025 360 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PCSK1P29120 753 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TTKP33981 857 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TALDO1P37837 337 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PIK3CBP42338 1070 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CHN2P52757 468 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 NR1H2P55055 460 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 HSD17B7P56937 341 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF33BQ06732 778 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ENPEPQ07075 957 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 KRT81Q14533 505 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SSPNQ14714 243 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 DPCR1Q3MIW9 517 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 VWA3BQ502W6 1294 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 JADE1Q6IE81 842 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 OR6B2Q6IFH4 312 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MTFR2Q6P444 385 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 AAGABQ6PD74 315 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 BHLHB9Q6PI77 547 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 RAD9BQ6WBX8 426 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MACC1Q6ZN28 852 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 Q6ZSR6 202 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CHST9Q7L1S5 443 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 BNIPLQ7Z465 357 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ABI3BPQ7Z7G0 1075 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PRUNE1Q86TP1 453 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TMEM200AQ86VY9 491 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CAMK1DQ8IU85 385 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TMEM126BQ8IUX1 230 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 DIS3L2Q8IYB7 885 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TBC1D21Q8IYX1 336 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 NRSN1Q8IZ57 195 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 LINC00518Q8N0U6 118 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PQLC1Q8N2U9 271 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CENPSQ8N2Z9 138 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MARVELD2Q8N4S9 558 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 Q8N9G6 341 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PLA2G15Q8NCC3 412 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 OR7D4Q8NG98 312 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 OR8H1Q8NGG4 311 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TEX47Q8TBZ9 253 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 FANK1Q8TC84 345 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TRUB1Q8WWH5 349 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 NRGNQ92686 78 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 RILPL2Q969X0 211 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MYLPFQ96A32 169 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 VPS33AQ96AX1 596 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PDXPQ96GD0 296 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 RBM18Q96H35 190 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 AJUBAQ96IF1 538 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TXNDC15Q96J42 360 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ZNF560Q96MR9 790 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TWNKQ96RR1 684 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 KRT12Q99456 494 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ECSITQ9BQ95 431 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 EIF2AK1Q9BQI3 630 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 MROQ9BYG7 248 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SPRTNQ9H040 489 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ILKAPQ9H0C8 392 aaPredicted RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 ZMAT3Q9HA38 289 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 FZD3Q9NPG1 666 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SH3GLB2Q9NR46 395 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 PARVAQ9NVD7 372 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 INTS13Q9NVM9 706 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 TRNAU1APQ9NX07 287 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 APOBEC3BQ9UH17 382 aaKnown RBP5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 CLEC4EQ9ULY5 219 aa5.32□□□□□ -1.56
ECHDC1-206ENST00000417628 SNX12Q9UMY4 172 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms