RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 PRAMEF2O60811 474 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 SEC24DO94855 1032 aaPredicted RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 UNC5CO95185 931 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 IL1RNP18510 177 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 TNFRSF8P28908 595 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 BTBD16Q32M84 506 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 LRRC8EQ6NSJ5 796 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 TMEM207Q6UWW9 146 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 LANCL3Q6ZV70 420 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 PRSS41Q7RTY9 318 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 CPEB2Q7Z5Q1 589 aaKnown RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 DNAJB8Q8NHS0 232 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 THAP11Q96EK4 314 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 CYTH2Q99418 400 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 FAM167BQ9BTA0 163 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 AARSD1Q9BTE6 412 aaKnown RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 PCBD2Q9H0N5 130 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 HCN3Q9P1Z3 774 aa13.65□□□□□ -0.22
PAF1-202ENST00000416728 SUCOQ9UBS9 1254 aaKnown RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 TRMT6Q9UJA5 497 aaKnown RBP13.65□□□□□ -0.22
PAF1-202ENST00000416728 DIDO1Q9BTC0 2240 aaKnown RBP13.65□□□□□ -0.23
PAF1-202ENST00000416728 TRGV8A0A0C4DH27 118 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 IGHV3-20A0A0C4DH32 117 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 A8MUI8 341 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 HAUS5O94927 633 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 BCL6P41182 706 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 MAGEA3P43357 314 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 XCR1P46094 333 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 MPP1Q00013 466 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 PTK6Q13882 451 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 NAA30Q147X3 362 aaPredicted RBP13.64□□□□□ -0.23
PAF1-202ENST00000416728 HSP90AA5PQ58FG0 334 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SP5Q6BEB4 398 aaPredicted RBP13.64□□□□□ -0.23
PAF1-202ENST00000416728 PLAG1Q6DJT9 500 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 TMEM214Q6NUQ4 689 aaKnown RBP13.64□□□□□ -0.23
PAF1-202ENST00000416728 UGT3A1Q6NUS8 523 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SRRM1Q8IYB3 904 aaKnown RBP13.64□□□□□ -0.23
PAF1-202ENST00000416728 AMER2Q8N7J2 671 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
PAF1-202ENST00000416728 CAMKVQ8NCB2 501 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 OR51Q1Q8NH59 317 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 CCDC138Q96M89 665 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 MACROD1Q9BQ69 325 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 ANKHQ9HCJ1 492 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SEC14L3Q9UDX4 400 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SVILO95425 2214 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 ITPR2Q14571 2701 aa13.64□□□□□ -0.23
PAF1-202ENST00000416728 SGK494L7N484 410 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 C8GP07360 202 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 MST1P26927 711 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 GRK3P35626 688 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 COILP38432 576 aaPredicted RBP13.63□□□□□ -0.23
PAF1-202ENST00000416728 RGS4P49798 205 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 AGTR2P50052 363 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 CSNK1G2P78368 415 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.63□□□□□ -0.23
PAF1-202ENST00000416728 CCDC137Q6PK04 289 aaKnown RBP13.63□□□□□ -0.23
PAF1-202ENST00000416728 ASPGQ86U10 573 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 C17orf64Q86WR6 236 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 PALM2Q8IXS6 379 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 RASGEF1CQ8N431 466 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 ZCCHC10Q8TBK6 192 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 ZNF354BQ96LW1 612 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 FAM129AQ9BZQ8 928 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 IARS2Q9NSE4 1012 aaKnown RBP13.63□□□□□ -0.23
PAF1-202ENST00000416728 ADAMTS6Q9UKP5 1117 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 PDE10AQ9Y233 779 aa13.63□□□□□ -0.23
PAF1-202ENST00000416728 FEZF1A0PJY2 475 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 RDH16O75452 317 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SLC35G6P0C7Q6 338 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 CCND1P24385 295 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SRSF11Q05519 484 aaKnown RBP13.62□□□□□ -0.23
PAF1-202ENST00000416728 RBPJQ06330 500 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SP140Q13342 867 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ART3Q13508 389 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 NAE1Q13564 534 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ZNF766Q5HY98 468 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ACER2Q5QJU3 275 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 MTFR2Q6P444 385 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 AGTRAPQ6RW13 159 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 MBOAT1Q6ZNC8 495 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ANKRD37Q7Z713 158 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 LRRC8AQ8IWT6 810 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SHISA5Q8N114 240 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 BEST3Q8N1M1 668 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 MYO1HQ8N1T3 1032 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 AGGF1Q8N302 714 aaeCLIP13.62□□□□□ -0.23
PAF1-202ENST00000416728 NAT8LQ8N9F0 302 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 KCT2Q8NC54 265 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 GABPB2Q8TAK5 448 aaPredicted RBP13.62□□□□□ -0.23
PAF1-202ENST00000416728 EEF1AKMT1Q8WVE0 214 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SLC13A3Q8WWT9 602 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 ITLN2Q8WWU7 325 aaPredicted RBP13.62□□□□□ -0.23
PAF1-202ENST00000416728 ALKBH8Q96BT7 664 aaKnown RBP13.62□□□□□ -0.23
PAF1-202ENST00000416728 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 PBKQ96KB5 322 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 SIGLEC10Q96LC7 697 aa13.62□□□□□ -0.23
PAF1-202ENST00000416728 NAP1L3Q99457 506 aaPredicted RBP13.62□□□□□ -0.23
PAF1-202ENST00000416728 NDNQ99608 321 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms