RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ELK3P41970 407 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 AP2B1P63010 937 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 MAT1AQ00266 395 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CDC16Q13042 620 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CAPN13Q6MZZ7 669 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 TMEM205Q6UW68 189 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 MBOAT1Q6ZNC8 495 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 ZC3H7AQ8IWR0 971 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 KLHL7Q8IXQ5 586 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 GPATCH11Q8N954 259 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 OR9A4Q8NGU2 314 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 METTL21AQ8WXB1 218 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 ALKBH8Q96BT7 664 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CFAP36Q96G28 342 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CAPZA3Q96KX2 299 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 HAUS8Q9BT25 410 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 SGPP1Q9BX95 441 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 ZNF700Q9H0M5 742 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 PLEKHB1Q9UF11 243 aaPredicted RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 CHMP2BQ9UQN3 213 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 VWA7Q9Y334 891 aa16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 MRPS2Q9Y399 296 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-208ENST00000416159 POLEQ07864 2286 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 MAST4O15021 2626 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 SOX11P35716 441 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 AP1S2P56377 157 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 ARL4CP56559 192 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 ARG2P78540 354 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 DR1Q01658 176 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 PHKG1Q16816 387 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 HECTD2Q5U5R9 776 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 DUPD1Q68J44 220 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 FAM45BPQ6NSW5 357 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 HIBCHQ6NVY1 386 aaPredicted RBP16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 RPUSD3Q6P087 351 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 ASPGQ86U10 573 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 CREG2Q8IUH2 290 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 ST6GALNAC3Q8NDV1 305 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 FAM45AQ8TCE6 357 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 BRIX1Q8TDN6 353 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 PSMF1Q92530 271 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 TM4SF19Q96DZ7 209 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 PLAC1Q9HBJ0 212 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 SCN3AQ9NY46 2000 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 PTGFRNQ9P2B2 879 aa16.66■□□□□ 0.26
PDLIM2-208ENST00000416159 DYTNA2CJ06 578 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 LCMT2O60294 686 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 TSPAN12O95859 305 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 STATHP02808 62 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 C8orf89P0DMQ9 161 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 NPPBP16860 134 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 BCL6P41182 706 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 GNG11P61952 73 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 FRG1Q14331 258 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 PCOLCEQ15113 449 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 HP1BP3Q5SSJ5 553 aaPredicted RBP16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 STEAP4Q687X5 459 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 TMEM214Q6NUQ4 689 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 CATSPER1Q8NEC5 780 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 OR56A3Q8NH54 315 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 GRHL3Q8TE85 626 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SLC13A3Q8WWT9 602 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 ATL1Q8WXF7 558 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 HAS2Q92819 552 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 PDLIM5Q96HC4 596 aaKnown RBP16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 PWWP2AQ96N64 755 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 TUBB6Q9BUF5 446 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 ANKHQ9HCJ1 492 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 ARL15Q9NXU5 204 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SLC17A6Q9P2U8 582 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SH2B3Q9UQQ2 575 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SLC5A6Q9Y289 635 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SAR1BQ9Y6B6 198 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 TEX264Q9Y6I9 313 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 SVILO95425 2214 aa16.65■□□□□ 0.26
PDLIM2-208ENST00000416159 ZGRF1Q86YA3 2104 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 FEZF1A0PJY2 475 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 CCDC188H7C350 402 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 UQCRHP07919 91 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 ENO2P09104 434 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 CDH1P12830 882 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 IL1RNP18510 177 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 PAFAH1B1P43034 410 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 CCR8P51685 355 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 ITGA8P53708 1063 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SNRPNP63162 240 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 C4orf17Q53FE4 359 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 TRMT10BQ6PF06 316 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SLC26A11Q86WA9 606 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 TBC1D19Q8N5T2 526 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SIRT6Q8N6T7 355 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 MFSD9Q8NBP5 474 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 ABHD11Q8NFV4 315 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 OR1N1Q8NGS0 311 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 OR51Q1Q8NH59 317 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 FAR1Q8WVX9 515 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 FBXL8Q96CD0 374 aa16.64■□□□□ 0.25
PDLIM2-208ENST00000416159 SNF8Q96H20 258 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms