RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 VIPP01282 170 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 CYP2A7P20853 494 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 PTX3P26022 381 aaPredicted RBP9.47□□□□□ -0.89
CD44-206ENST00000415148 GJA8P48165 433 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ELP6Q0PNE2 266 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 LRRC74AQ0VAA2 488 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 DOC2BQ14184 412 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 TAF12Q16514 161 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 UGT8Q16880 541 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ZXDCQ2QGD7 858 aaPredicted RBP9.47□□□□□ -0.89
CD44-206ENST00000415148 PTCHD3Q3KNS1 767 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 IQCCQ4KMZ1 466 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 TPGS2Q68CL5 300 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 RGMBQ6NW40 437 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 CRTC1Q6UUV9 634 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ZNF621Q6ZSS3 439 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 CELF2-AS1Q8N7Q2 184 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ZNF461Q8TAF7 563 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ZHX1-C8orf76Q96EF9 292 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 SCRN2Q96FV2 425 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 HSH2DQ96JZ2 352 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 EGLN2Q96KS0 407 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 C7orf34Q96L11 122 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 APOLD1Q96LR9 279 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
CD44-206ENST00000415148 HOXD1Q9GZZ0 328 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 TPK1Q9H3S4 243 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 ADPRHL2Q9NX46 363 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 THUMPD1Q9NXG2 353 aaKnown RBP9.47□□□□□ -0.89
CD44-206ENST00000415148 BTNL2Q9UIR0 455 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.47□□□□□ -0.89
CD44-206ENST00000415148 PADI2Q9Y2J8 665 aa9.47□□□□□ -0.89
CD44-206ENST00000415148 DSCR3O14972 297 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 SMAD6O43541 496 aaKnown RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 GREM1O60565 184 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 UPK1BO75841 260 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 PRKAR2AP13861 404 aaKnown RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 HSD3B1P14060 373 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 SELPP16109 830 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 GADD45AP24522 165 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 HSD3B2P26439 372 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 GATMP50440 423 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 SMAD3P84022 425 aaKnown RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 SREBF2Q12772 1141 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 CAMK2GQ13555 558 aaPredicted RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 TBCEQ15813 527 aaPredicted RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 ZNF181Q2M3W8 571 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 DESI1Q6ICB0 168 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 Q6ZNB5 142 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 CYP2U1Q7Z449 544 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 P3H2Q8IVL5 708 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 APCDD1Q8J025 514 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 CRIPAKQ8N1N5 446 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 PAF1Q8N7H5 531 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 MCFD2Q8NI22 146 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 CAPSLQ8WWF8 208 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 PROX1Q92786 737 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 DPH2Q9BQC3 489 aaPredicted RBP9.46□□□□□ -0.89
CD44-206ENST00000415148 ARHGAP39Q9C0H5 1083 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 DCSTAMPQ9H295 470 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 ABCB8Q9NUT2 735 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 SPATA7Q9P0W8 599 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 VPS29Q9UBQ0 182 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 PCDHGA6Q9Y5G7 932 aa9.46□□□□□ -0.89
CD44-206ENST00000415148 A8MVJ9 347 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 M0R129 80 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ADRA2AP08913 450 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 DBTP11182 482 aaKnown RBP9.46□□□□□ -0.9
CD44-206ENST00000415148 COX7A2P14406 83 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 SLC19A1P41440 591 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 KCNJ10P78508 379 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ZXDBP98169 803 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 B4GALNT1Q00973 533 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 PCDH1Q08174 1060 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ELOAQ14241 798 aaKnown RBP9.46□□□□□ -0.9
CD44-206ENST00000415148 VEPH1Q14D04 833 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 TEAD4Q15561 434 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 HKDC1Q2TB90 917 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ZNF404Q494X3 552 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 FBXO43Q4G163 708 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 MPP7Q5T2T1 576 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ANXA8L1Q5VT79 327 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 CAMKMTQ7Z624 323 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 ENTHD1Q8IYW4 607 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 POC5Q8NA72 575 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 VPS37AQ8NEZ2 397 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 BCL7CQ8WUZ0 217 aaPredicted RBP9.46□□□□□ -0.9
CD44-206ENST00000415148 ASIC4Q96FT7 647 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 NXF2Q9GZY0 626 aaKnown RBP9.46□□□□□ -0.9
CD44-206ENST00000415148 CHST8Q9H2A9 424 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 TP63Q9H3D4 680 aaPredicted RBP9.46□□□□□ -0.9
CD44-206ENST00000415148 TPT1P8Q9HAU6 139 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 TMEM184CQ9NVA4 438 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 FKBP14Q9NWM8 211 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 KLHL3Q9UH77 587 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 PSORS1C1Q9UIG5 152 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 SLC6A14Q9UN76 642 aa9.46□□□□□ -0.9
CD44-206ENST00000415148 SLC22A14Q9Y267 594 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms