RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 EXOC6BQ9Y2D4 811 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 TEX264Q9Y6I9 313 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 IL16Q14005 1332 aa4.34□□□□□ -1.71
HMGB3P31-201ENST00000413333 PFASO15067 1338 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 A0A087X0K7 114 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 FAM149AA5PLN7 773 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZNF197O14709 1029 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 STAM2O75886 525 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 TSHBP01222 138 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 ABHD2P08910 425 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 IGHV4-38-2P0DP08 117 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 AMD1P17707 334 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 CEACAM8P31997 349 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 NR0B1P51843 470 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 CLDN17P56750 224 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 FKBP1BP68106 108 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 GPR17Q13304 367 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 RBM39Q14498 530 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PDK1Q15118 436 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 LCN1P1Q5VSP4 162 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 KLHL10Q6JEL2 608 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 C9orf139Q6ZV77 190 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRUNE1Q86TP1 453 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZNF410Q86VK4 478 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 RCOR2Q8IZ40 523 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 TDHQ8IZJ6 230 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 THEM5Q8N1Q8 247 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRSS35Q8N3Z0 413 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 GBP7Q8N8V2 638 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR7A2PQ8NGA2 310 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 OR4C15Q8NGM1 316 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 URGCPQ8TCY9 931 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PIK3R3Q92569 461 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 LGALS12Q96DT0 336 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 EEF2KMTQ96G04 330 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 CFAP36Q96G28 342 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 DDX50Q9BQ39 737 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 RPF1Q9H9Y2 349 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PPANQ9NQ55 473 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 MRPL17Q9NRX2 175 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 C19orf25Q9UFG5 118 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 AGTPBP1Q9UPW5 1226 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 KCNK6Q9Y257 313 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 STRAPQ9Y3F4 350 aaKnown RBP4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 COLEC10Q9Y6Z7 277 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
HMGB3P31-201ENST00000413333 PCSK5Q92824 1860 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 ARID2Q68CP9 1835 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 TRBV5-5A0A0J9YX44 114 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 ANTXRLA6NF34 631 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 INO80B-WBP1J3KQ70 363 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 EPHB6O15197 1021 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 INSIG1O15503 277 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 BUB3O43684 328 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 SCO2O43819 266 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 B3GALNT1O75752 331 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 LETM1O95202 739 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 GAS8O95995 478 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 CRYAAP02489 173 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 FRMD6-AS1P0C7T7 363 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 MARK3P27448 753 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 DNA2P51530 1060 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 LUMP51884 338 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 HERV-K104P61576 105 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 LCP2Q13094 533 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 ARMCX4Q5H9R4 360 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 WDR38Q5JTN6 314 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 AGAP6Q5VW22 663 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 UGT3A1Q6NUS8 523 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 GDPD4Q6W3E5 623 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 LAX1Q8IWV1 398 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 CIARTQ8N365 385 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 RSPH1Q8WYR4 309 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 PRCCQ92733 491 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 WBP2Q969T9 261 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 CDCA3Q99618 268 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 MEIS3Q99687 375 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 FAM49AQ9H0Q0 323 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 DPEP2Q9H4A9 486 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 DONSONQ9NYP3 566 aa4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 HOOK1Q9UJC3 728 aaKnown RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 RPH3AQ9Y2J0 694 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P31-201ENST00000413333 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 CCDC69A6NI79 296 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SNURFLB1AK76 121 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 RNF103O00237 685 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 O00370 1275 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC22A2O15244 555 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 HSF2BPO75031 334 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 GMNNO75496 209 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 DFFBO76075 338 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 NGFP01138 241 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 SLC4A1P02730 911 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 ATP1B1P05026 303 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 FGF3P11487 239 aaPredicted RBP4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 GP1BBP13224 206 aa4.31□□□□□ -1.72
HMGB3P31-201ENST00000413333 FERP16591 822 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms