RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 RUVBL1Q9Y265 456 aaKnown RBP13.35□□□□□ -0.27
GYPC-203ENST00000409836 ASB1Q9Y576 335 aa13.35□□□□□ -0.27
GYPC-203ENST00000409836 SPTA1P02549 2419 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 HYKKA2RU49 373 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 NCF1BA6NI72 391 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 NCF1CA8MVU1 366 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 C9J4A7 227 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 STX16-NPEPL1H3BU86 382 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 UBXN8O00124 270 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 STX16O14662 325 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 MAP2K7O14733 419 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 PRAMEF4O60810 478 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 KLF7O75840 302 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 WDR47O94967 919 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 S100BP04271 92 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 GSTA1P08263 222 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 NCF1P14598 390 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 TCN2P20062 427 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 HSPA7P48741 367 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 RHDQ02161 417 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 CDC20Q12834 499 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 DSG2Q14126 1118 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 PDK4Q16654 411 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 UGT8Q16880 541 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 C18orf21Q32NC0 220 aaPredicted RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 CATSPEREQ5SY80 951 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 PRAMEF9Q5VWM5 478 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 LCN10Q6JVE6 187 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 TMPRSS11BQ86T26 416 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 ZSCAN1Q8NBB4 408 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 NT5CQ8TCD5 201 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 TTC9Q92623 222 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 MR1Q95460 341 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 WBP1Q96G27 269 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 TSNARE1Q96NA8 513 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 MRPL57Q9BQC6 102 aaKnown RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 TMEM109Q9BVC6 243 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 C1QTNF3Q9BXJ4 246 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 PARD6BQ9BYG5 372 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 VPS11Q9H270 941 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 SPNS1Q9H2V7 528 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 MRPL46Q9H2W6 279 aaKnown RBP13.34□□□□□ -0.27
GYPC-203ENST00000409836 MKS1Q9NXB0 559 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 XPR1Q9UBH6 696 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 LGALS13Q9UHV8 139 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 ZFP69BQ9UJL9 534 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 DYRK1BQ9Y463 629 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 COL6A6A6NMZ7 2263 aa13.34□□□□□ -0.27
GYPC-203ENST00000409836 SUPT3HB4E1H0 165 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 K7EPI3 171 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TK2O00142 265 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 SUPT3HO75486 399 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 CREG1O75629 220 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 SBK3P0C264 359 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 C1GALT1C1LP0DN25 315 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 AGXTP21549 392 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 GDF5P43026 501 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 CXADRP78310 365 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 HKDC1Q2TB90 917 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 ADCK2Q7Z695 626 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 ASPGQ86U10 573 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 PLD3Q8IV08 490 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TBC1D19Q8N5T2 526 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TTLQ8NG68 377 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 NACC2Q96BF6 587 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 AIF1LQ9BQI0 150 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 EFCAB11Q9BUY7 163 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 SLC6A16Q9GZN6 736 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 DRC3Q9H069 523 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 GEMIN8Q9NWZ8 242 aaKnown RBP13.33□□□□□ -0.28
GYPC-203ENST00000409836 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.33□□□□□ -0.28
GYPC-203ENST00000409836 NXT1Q9UKK6 140 aaKnown RBP13.33□□□□□ -0.28
GYPC-203ENST00000409836 TCFL5Q9UL49 500 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 PADI2Q9Y2J8 665 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TSC22D4Q9Y3Q8 395 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 TNPO3Q9Y5L0 923 aaKnown RBP13.33□□□□□ -0.28
GYPC-203ENST00000409836 SLC22A7Q9Y694 548 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 V9GYY5 206 aaPredicted RBP13.33□□□□□ -0.28
GYPC-203ENST00000409836 PCSK5Q92824 1860 aa13.33□□□□□ -0.28
GYPC-203ENST00000409836 A0A1W2PQ72 361 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 VSTM2BA6NLU5 285 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 H0YIG0 161 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 ERVH48-1M5A8F1 160 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 E2F3O00716 465 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 PRPF4O43172 522 aaKnown RBP eCLIP13.32□□□□□ -0.28
GYPC-203ENST00000409836 FOXS1O43638 330 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 LCMT2O60294 686 aaKnown RBP13.32□□□□□ -0.28
GYPC-203ENST00000409836 UGDHO60701 494 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
GYPC-203ENST00000409836 WFS1O76024 890 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 NSA2O95478 260 aaKnown RBP13.32□□□□□ -0.28
GYPC-203ENST00000409836 CYC1P08574 325 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 SLC35G6P0C7Q6 338 aa13.32□□□□□ -0.28
GYPC-203ENST00000409836 PIM1P11309 404 aaPredicted RBP13.32□□□□□ -0.28
GYPC-203ENST00000409836 CD22P20273 847 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms