RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CCDC163A0A0D9SF12 145 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 A0A1W2PPV9 198 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 TCRBV3S1A0A5B6 114 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PDZK1P1A8MUH7 402 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 H0Y8X5 98 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 AXIN1O15169 862 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 CXCR2P25025 360 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PKLRP30613 574 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ASMTP46597 345 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 GSK3BP49841 420 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 HNRNPFP52597 415 aaKnown RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ATXN3P54252 364 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 RHDQ02161 417 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 LIPEQ05469 1076 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 RPE65Q16518 533 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 GALNT18Q6P9A2 607 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 WASH2PQ6VEQ5 465 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PTRH1Q86Y79 214 aaKnown RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 SYT12Q8IV01 421 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 C2orf73Q8N5S3 287 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 C1orf52Q8N6N3 182 aaKnown RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 TMEM145Q8NBT3 493 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ABHD11Q8NFV4 315 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 STARD8Q92502 1023 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 SH3KBP1Q96B97 665 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PDXPQ96GD0 296 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 LRGUKQ96M69 825 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 SPNS1Q9H2V7 528 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 RMND5AQ9H871 391 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 PRDM8Q9NQV8 689 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ZSCAN32Q9NX65 697 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ACTR3BQ9P1U1 418 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 GMPR2Q9P2T1 348 aaKnown RBP13.54□□□□□ -0.24
LIMS2-206ENST00000409754 ADGRE2Q9UHX3 823 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 MAN2B2Q9Y2E5 1009 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 NEUROG3Q9Y4Z2 214 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 THADAQ6YHU6 1953 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 DMXL1Q9Y485 3027 aa13.54□□□□□ -0.24
LIMS2-206ENST00000409754 IGHV1OR15-9A0A0B4J2B8 117 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 AQP12BA6NM10 295 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 CASQ2O14958 399 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KDM1AO60341 852 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 ERN1O75460 977 aaKnown RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 OXTRP30559 389 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TIA1P31483 386 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 CCR8P51685 355 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PHC1P78364 1004 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 SRSF11Q05519 484 aaKnown RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KRT33BQ14525 404 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 FXNQ16595 210 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TPRG1LQ5T0D9 272 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 IRAK1BP1Q5VVH5 260 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KIAA0895LQ68EN5 471 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 LCN8Q6JVE9 175 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 ABRAXAS1Q6UWZ7 409 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TMIGD1Q6UXZ0 262 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 AQP12AQ8IXF9 295 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PQLC1Q8N2U9 271 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 GOLM1Q8NBJ4 401 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 OR2L8Q8NGY9 312 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 EGLN2Q96KS0 407 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 AIF1LQ9BQI0 150 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 ACAT2Q9BWD1 397 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KCNH6Q9H252 994 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 RHBGQ9H310 441 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 NT5DC2Q9H857 520 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PRM3Q9NNZ6 103 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 ZFHX2Q9C0A1 2572 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 GON4LQ3T8J9 2241 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 A0A096LPI6 279 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PRSS51A0A1B0GVH4 220 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 OR52A4PA6NMU1 304 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PRAMEF26H0Y7S4 382 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 IGHV4-34P06331 123 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 HTR1EP28566 365 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 SERPINB1P30740 379 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 REEP5Q00765 189 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 MEF2AQ02078 507 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 MUM1Q2TAK8 710 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 CMPK2Q5EBM0 449 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 LRIF1Q5T3J3 769 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 GPR180Q86V85 440 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TMEM126BQ8IUX1 230 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 OR4K1Q8NGD4 311 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 DNAJC9Q8WXX5 260 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 ITCHQ96J02 903 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 NRTNQ99748 197 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 SH3GL1Q99961 368 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 VCX3BQ9H321 246 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-206ENST00000409754 KIR3DX1Q9H7L2 352 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms