RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ABATP80404 500 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 TIAL1Q01085 375 aaKnown RBP eCLIP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ABRQ12979 859 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 SERPINA11Q86U17 422 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 LDB1Q86U70 411 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 IFNL1Q8IU54 200 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 UBE2J2Q8N2K1 259 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 CARNMT1Q8N4J0 409 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 NKAPQ8N5F7 415 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 B3GNT7Q8NFL0 401 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 OR4F6Q8NGB9 312 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 WDR36Q8NI36 951 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 NDRG1Q92597 394 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 UPRTQ96BW1 309 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ULK4Q96C45 1275 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 RPRD1AQ96P16 312 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 OR52E6Q96RD3 313 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 AARSD1Q9BTE6 412 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ZNF416Q9BWM5 594 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 DUSP16Q9BY84 665 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ATXN3LQ9H3M9 355 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ATP13A1Q9HD20 1204 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 RBM22Q9NW64 420 aaKnown RBP eCLIP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 MS4A12Q9NXJ0 267 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 SLC39A1Q9NY26 324 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 TAS2R13Q9NYV9 303 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 TAS2R7Q9NYW3 318 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ENOPH1Q9UHY7 261 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 ADAM30Q9UKF2 790 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 NDRG2Q9UN36 371 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 DUSP12Q9UNI6 340 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 MAN2B2Q9Y2E5 1009 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 PRELID3BQ9Y3B1 194 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 MAB21L2Q9Y586 359 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 PCDHGB3Q9Y5G1 929 aa5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 KLF2Q9Y5W3 355 aaPredicted RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 BRCA1P38398 1863 aaKnown RBP5.65□□□□□ -1.5
R3HDM1-202ENST00000409478 KRBOX1C9JBD0 128 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RGS14O43566 566 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 B3GALNT1O75752 331 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CELF2O95319 508 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CYP17A1P05093 508 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HLA-DQB2P05538 268 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 FAM157BP0CG42 384 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HLA-EP13747 358 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HOXB3P14651 431 aaPredicted RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC2A4P14672 509 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HK1P19367 917 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 IDH2P48735 452 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 PPP3R1P63098 170 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 EXOSC2Q13868 293 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 NFE2L1Q14494 772 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 PLAG1Q6DJT9 500 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 NADSYN1Q6IA69 706 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 ARMCX2Q7L311 632 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC44A2Q8IWA5 706 aaPredicted RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CLHC1Q8NHS4 586 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 FUBP1Q96AE4 644 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 MTERF3Q96E29 417 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RADILQ96JH8 1075 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 MED28Q9H204 178 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 MIXL1Q9H2W2 232 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 ELOVL6Q9H5J4 265 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 WDCPQ9H6R7 721 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 PCDHB16Q9NRJ7 776 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 SIRT5Q9NXA8 310 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RDH8Q9NYR8 311 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 GALPQ9UBC7 116 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 NLKQ9UBE8 527 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 NCKAP1Q9Y2A7 1128 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HRH3Q9Y5N1 445 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RNF215Q9Y6U7 377 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 GFRA2O00451 464 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 E2F3O00716 465 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 HRO43593 1189 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 MAFKO60675 156 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RHOBTB1O94844 696 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 FHP07954 510 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 ANXA8P13928 327 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RPL17P18621 184 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 UBA1P22314 1058 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CLCNKAP51800 687 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 MAP2K6P52564 334 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 AP1S2P56377 157 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 ERVPABLB-1P60509 514 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CDC42P60953 191 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RPL38P63173 70 aaKnown RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 VLDLRP98155 873 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RPA4Q13156 261 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 COL19A1Q14993 1142 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 PTCHD3Q3KNS1 767 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 FLYWCH1Q4VC44 716 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 RFTN2Q52LD8 501 aaPredicted RBP5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 KLHL22Q53GT1 634 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 SPANXN4Q5MJ08 99 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 CFAP77Q6ZQR2 320 aa5.65□□□□□ -1.51
R3HDM1-202ENST00000409478 SLC34A3Q8N130 599 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms