RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 PRPS1L1P21108 318 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 IDSP22304 550 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 IMPA1P29218 277 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 DNAJA1P31689 397 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 SLC19A1P41440 591 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 CTSCP53634 463 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 IL5RAQ01344 420 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ATP1A4Q13733 1029 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 LMNTD1Q8N9Z9 388 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 CHTF18Q8WVB6 975 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 COQ8BQ96D53 544 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 RMND5AQ9H871 391 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 HMX1Q9NP08 348 aaPredicted RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 RLIMQ9NVW2 624 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 STOX2Q9P2F5 926 aaPredicted RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 MAGEB17A8MXT2 336 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 UGDHO60701 494 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 CBFA2T3O75081 653 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 LCKP06239 509 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 HKDC1Q2TB90 917 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 RFX4Q33E94 735 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 LIPJQ5W064 366 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PDE12Q6L8Q7 609 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 KIAA0907Q7Z7F0 614 aaPredicted RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 DDX53Q86TM3 631 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 RASGEF1AQ8N9B8 481 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 NRBF2Q96F24 287 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 DACH2Q96NX9 599 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PANX1Q96RD7 426 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 MRPL17Q9NRX2 175 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 CREBZFQ9NS37 354 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 THUMPD1Q9NXG2 353 aaKnown RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 SELENONQ9NZV5 590 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PDP1Q9P0J1 537 aaPredicted RBP9.5□□□□□ -0.89
MSH2-202ENST00000406134 RNF6Q9Y252 685 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 ZNF451Q9Y4E5 1061 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 PCDHB11Q9Y5F2 797 aa9.5□□□□□ -0.89
MSH2-202ENST00000406134 A0A1W2PRU2 124 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TSPAN11A1L157 253 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PCDH7O60245 1069 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 LILRB5O75023 590 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 RFPL2O75678 378 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 ABCB1P08183 1280 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 TNFRSF1BP20333 461 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 OPRD1P41143 372 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 ETV3P41162 512 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 LIMS1P48059 325 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 DCDC1P59894 354 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 SNRPD1P62314 119 aaKnown RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 VEPH1Q14D04 833 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 UBE2UQ5VVX9 321 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 GRHL2Q6ISB3 625 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 KIAA1841Q6NSI8 718 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 LILRA6Q6PI73 481 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 USP45Q70EL2 814 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 THOC6Q86W42 341 aaKnown RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 LRRC56Q8IYG6 542 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 DDHD1Q8NEL9 900 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 RAET1EQ8TD07 263 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 CSGALNACT1Q8TDX6 532 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 HCFC1R1Q9NWW0 138 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 NDUFAF4Q9P032 175 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PADI2Q9Y2J8 665 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 HCFC2Q9Y5Z7 792 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 SLC5A10A0PJK1 596 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 CFAP99D6REC4 459 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 E2F6O75461 281 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 HNRNPCP07910 306 aaKnown RBP eCLIP9.49□□□□□ -0.89
MSH2-202ENST00000406134 OR56A5P0C7T3 313 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 OCM2P0CE71 109 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 OCMP0CE72 109 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 ZNF8P17098 575 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 ITGB8P26012 769 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 LIPAP38571 399 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 BDKRB1P46663 353 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PREPP48147 710 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 CRISP3P54108 245 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 EPHB3P54753 998 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 VEZF1Q14119 521 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TTC29Q8NA56 475 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 OR56A3Q8NH54 315 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 HRASLS5Q96KN8 279 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 EPYCQ99645 322 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 BCL7BQ9BQE9 202 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 SPNS1Q9H2V7 528 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 NECTIN3Q9NQS3 549 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 FAM120CQ9NX05 1096 aaKnown RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 VPS29Q9UBQ0 182 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 LYVE1Q9Y5Y7 322 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 C2orf16Q68DN1 1984 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PRMT3O60678 531 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 GMNNO75496 209 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TNFRSF21O75509 655 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 TBX6O95947 436 aaPredicted RBP9.49□□□□□ -0.89
MSH2-202ENST00000406134 HLA-EP13747 358 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 PDHA2P29803 388 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 RAD23AP54725 363 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 AP1S2P56377 157 aa9.49□□□□□ -0.89
MSH2-202ENST00000406134 RPP38P78345 283 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms