RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 TRIM73Q86UV7 250 aa8.78□□□□□ -1
LIG4-202ENST00000405925 PLPP6Q8IY26 295 aa8.78□□□□□ -1
LIG4-202ENST00000405925 ZDHHC12Q96GR4 267 aa8.78□□□□□ -1
LIG4-202ENST00000405925 LRCH3Q96II8 777 aa8.78□□□□□ -1
LIG4-202ENST00000405925 SLC35A5Q9BS91 424 aa8.78□□□□□ -1
LIG4-202ENST00000405925 MAT2BQ9NZL9 334 aa8.78□□□□□ -1
LIG4-202ENST00000405925 SPATA7Q9P0W8 599 aa8.78□□□□□ -1
LIG4-202ENST00000405925 NCDNQ9UBB6 729 aa8.78□□□□□ -1
LIG4-202ENST00000405925 TEKT2Q9UIF3 430 aa8.78□□□□□ -1
LIG4-202ENST00000405925 PCDHGA2Q9Y5H1 932 aa8.78□□□□□ -1
LIG4-202ENST00000405925 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1
LIG4-202ENST00000405925 ATXN2Q99700 1313 aaKnown RBP8.77□□□□□ -1
LIG4-202ENST00000405925 SNTNA6NMZ2 147 aa8.77□□□□□ -1
LIG4-202ENST00000405925 PEX11BO96011 259 aa8.77□□□□□ -1
LIG4-202ENST00000405925 DCNP07585 359 aaKnown RBP8.77□□□□□ -1
LIG4-202ENST00000405925 XRCC1P18887 633 aaPredicted RBP8.77□□□□□ -1
LIG4-202ENST00000405925 SERPINB1P30740 379 aa8.77□□□□□ -1
LIG4-202ENST00000405925 OPRD1P41143 372 aa8.77□□□□□ -1
LIG4-202ENST00000405925 TPMTP51580 245 aa8.77□□□□□ -1
LIG4-202ENST00000405925 PCBP2Q15366 365 aaKnown RBP eCLIP8.77□□□□□ -12e-6■■■■■ 29.1
LIG4-202ENST00000405925 RABL3Q5HYI8 236 aa8.77□□□□□ -1
LIG4-202ENST00000405925 ARHGAP40Q5TG30 622 aa8.77□□□□□ -1
LIG4-202ENST00000405925 GALNT7Q86SF2 657 aa8.77□□□□□ -1
LIG4-202ENST00000405925 PACS2Q86VP3 889 aa8.77□□□□□ -1
LIG4-202ENST00000405925 LILRA3Q8N6C8 439 aaPredicted RBP8.77□□□□□ -1
LIG4-202ENST00000405925 COX18Q8N8Q8 333 aa8.77□□□□□ -1
LIG4-202ENST00000405925 GPR151Q8TDV0 419 aa8.77□□□□□ -1
LIG4-202ENST00000405925 UBXN10Q96LJ8 280 aa8.77□□□□□ -1
LIG4-202ENST00000405925 TMEM74Q96NL1 305 aa8.77□□□□□ -1
LIG4-202ENST00000405925 CIB1Q99828 191 aa8.77□□□□□ -1
LIG4-202ENST00000405925 PHF11Q9UIL8 331 aa8.77□□□□□ -1
LIG4-202ENST00000405925 STOML2Q9UJZ1 356 aa8.77□□□□□ -1
LIG4-202ENST00000405925 C3orf18Q9UK00 162 aa8.77□□□□□ -1
LIG4-202ENST00000405925 MMP17Q9ULZ9 603 aa8.77□□□□□ -1
LIG4-202ENST00000405925 SHROOM3Q8TF72 1996 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 SRCAPQ6ZRS2 3230 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 PRSS51A0A1B0GVH4 220 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 MAGEA13PA6NCF6 341 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 CXCR6O00574 342 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 DNAJA2O60884 412 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 RSL1D1O76021 490 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 RPS17P08708 135 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 MTHFD1P11586 935 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 ENGP17813 658 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 YAP1P46937 504 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 CSNK1EP49674 416 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 FOXA1P55317 472 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 LRP8Q14114 963 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 DEFB110Q30KQ9 67 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 KHDC1Q4VXA5 237 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 TMEM196Q5HYL7 178 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 C10orf62Q5T681 223 aaPredicted RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 NEK5Q6P3R8 708 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 ASPGQ86U10 573 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 ASB11Q8WXH4 323 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 MSANTD3Q96H12 275 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 S100A14Q9HCY8 104 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 KLHL42Q9P2K6 505 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 ENOPH1Q9UHY7 261 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 SERTAD3Q9UJW9 196 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 DMTF1Q9Y222 760 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 C15orf41Q9Y2V0 281 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 CLCA3PQ9Y6N3 262 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 VGLL3A8MV65 326 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 PTGES3LE9PB15 166 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 K7ESM1 405 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 DUX1O43812 170 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 SCELO95171 688 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 MAGP20916 626 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 TIA1P31483 386 aaKnown RBP eCLIP8.77□□□□□ -1.01
LIG4-202ENST00000405925 CAPZA2P47755 286 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 CLK3P49761 638 aaKnown RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 KIAA0895LQ68EN5 471 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 BNIPLQ7Z465 357 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 MICU2Q8IYU8 434 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 OR7G3Q8NG95 312 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 HCAR2Q8TDS4 363 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 ZNF480Q8WV37 535 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 AURKBQ96GD4 344 aaPredicted RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 PRR11Q96HE9 360 aaPredicted RBP8.77□□□□□ -1.01
LIG4-202ENST00000405925 APOL4Q9BPW4 351 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 PDE7BQ9NP56 450 aa8.77□□□□□ -1.01
LIG4-202ENST00000405925 GPR89AB7ZAQ6 455 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 OR6A2O95222 327 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 FAM58BPP0C7Q3 252 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 GPR89BP0CG08 455 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 NR2F6P10588 404 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 CLK1P49759 484 aaKnown RBP8.76□□□□□ -1.01
LIG4-202ENST00000405925 GSK3BP49841 420 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 ADPRHP54922 357 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 SMIM11AP58511 58 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 DCDC1P59894 354 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 XIAPP98170 497 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 DLX2Q07687 328 aaPredicted RBP8.76□□□□□ -1.01
LIG4-202ENST00000405925 HSF5Q4G112 596 aaPredicted RBP8.76□□□□□ -1.01
LIG4-202ENST00000405925 PRSS36Q5K4E3 855 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 IER5LQ5T953 404 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 LPCAT4Q643R3 524 aa8.76□□□□□ -1.01
LIG4-202ENST00000405925 CAPRIN2Q6IMN6 1127 aaKnown RBP8.76□□□□□ -1.01
LIG4-202ENST00000405925 FAM92BQ6ZTR7 304 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms