RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 IL22RA1Q8N6P7 574 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ANKRD53Q8N9V6 530 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SLC13A3Q8WWT9 602 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 MR1Q95460 341 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 TM4SF19Q96DZ7 209 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 WDR34Q96EX3 536 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 NSUN5Q96P11 429 aaKnown RBP16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 SARGQ9BW04 601 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 DPH1Q9BZG8 443 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 EHD1Q9H4M9 534 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 NOL11Q9H8H0 719 aaKnown RBP16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 IPPKQ9H8X2 491 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 CUTCQ9NTM9 273 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 MKS1Q9NXB0 559 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PCTPQ9UKL6 214 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 ZNF490Q9ULM2 529 aaPredicted RBP16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 RUVBL1Q9Y265 456 aaKnown RBP16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 PLLPQ9Y342 182 aa16.4■□□□□ 0.22
PTCHD3P3-201ENST00000403073 LOC101059948A0A1B0GTJ6 334 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 WFS1O76024 890 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SERPIND1P05546 499 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 KLK3P07288 261 aaPredicted RBP16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MYL2P10916 166 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CPA3P15088 417 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CXCR2P25025 360 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ATP1A2P50993 1020 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PRKAA2P54646 552 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ARSFP54793 590 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CDH13P55290 713 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SNRPNP63162 240 aaKnown RBP16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CYP4F2P78329 520 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NFKB2Q00653 900 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 FAM214AQ32MH5 1076 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 UNC50Q53HI1 259 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TNFAIP8L3Q5GJ75 292 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 METTL2BQ6P1Q9 378 aaKnown RBP16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TMIGD1Q6UXZ0 262 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZYG11AQ6WRX3 759 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ASPGQ86U10 573 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 VASH2Q86V25 355 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SPACA3Q8IXA5 215 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 DSELQ8IZU8 1212 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 KRT78Q8N1N4 520 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CCDC63Q8NA47 563 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TCP10LQ8TDR4 215 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PGM2Q96G03 612 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 LRFN5Q96NI6 719 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 IQCGQ9H095 443 aaKnown RBP16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 LHX9Q9NQ69 397 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TXLNGQ9NUQ3 528 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SLC17A7Q9P2U7 560 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NDOR1Q9UHB4 597 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZFP69BQ9UJL9 534 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SRPK3Q9UPE1 567 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 WDFY3Q8IZQ1 3526 aa16.39■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TXNDC9O14530 226 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 OR7A17O14581 309 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 KATNA1O75449 491 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SUPT7LO94864 414 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 RPS17P08708 135 aaKnown RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MYZAPP0CAP1 466 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TSPAN8P19075 237 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 IMPDH1P20839 514 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ITPKBP27987 946 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 STAT5AP42229 794 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CASP2P42575 452 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PIK3CGP48736 1102 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 HERVK_113P63132 956 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PCDH1Q08174 1060 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ABHD18Q0P651 414 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TBCCQ15814 346 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZNF678Q5SXM1 525 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZNF385CQ66K41 422 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 LRRC69Q6ZNQ3 347 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 METTL27Q8N6F8 245 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 KCT2Q8NC54 265 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CAMKVQ8NCB2 501 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ARMC2Q8NEN0 867 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZNF483Q8TF39 744 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 C10orf90Q96M02 699 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 GBP5Q96PP8 586 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TMEM237Q96Q45 408 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 EFCAB11Q9BUY7 163 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 C1QTNF3Q9BXJ4 246 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ERVK-6Q9BXR3 956 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NLNQ9BYT8 704 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 CHST8Q9H2A9 424 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NT5DC2Q9H857 520 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ACTR8Q9H981 624 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 ZBTB26Q9HCK0 441 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SEMA4BQ9NPR2 832 aaPredicted RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 SENP1Q9P0U3 644 aa16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 MRPS2Q9Y399 296 aaKnown RBP16.38■□□□□ 0.21
PTCHD3P3-201ENST00000403073 AGPSO00116 658 aa16.37■□□□□ 0.21
PTCHD3P3-201ENST00000403073 PPP6CO00743 305 aa16.37■□□□□ 0.21
PTCHD3P3-201ENST00000403073 DSCR3O14972 297 aa16.37■□□□□ 0.21
PTCHD3P3-201ENST00000403073 NDUFS4O43181 175 aa16.37■□□□□ 0.21
PTCHD3P3-201ENST00000403073 TYROBPO43914 113 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms