RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PRMT3O60678 531 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 CELA2BP08218 269 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-205ENST00000401607 PRPS1L1P21108 318 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 CD27P26842 260 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 RPS9P46781 194 aaKnown RBP24.6■■□□□ 1.53
CPNE1-205ENST00000401607 ATXN3P54252 364 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-205ENST00000401607 C21orf58P58505 322 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 PLIN5Q00G26 463 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 MAPKAPK3Q16644 382 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 FAM20CQ8IXL6 584 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 CAMKK1Q8N5S9 505 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 BHLHE22Q8NFJ8 381 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-205ENST00000401607 FAM174AQ8TBP5 190 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 PITHD1Q9GZP4 211 aaPredicted RBP24.6■■□□□ 1.53
CPNE1-205ENST00000401607 AKAP10O43572 662 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 ANXA4P09525 319 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-205ENST00000401607 HSD17B1P14061 328 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 S100A3P33764 101 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 SHMT2P34897 504 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 AP2B1P63010 937 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 UGT8Q16880 541 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 PRR23BQ6ZRT6 265 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 COMMD6Q7Z4G1 85 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 AMIGO1Q86WK6 493 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 LCN9Q8WX39 176 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 PPM1MQ96MI6 270 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 CGREF1Q99674 301 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 GSDMCQ9BYG8 508 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 SLC6A20Q9NP91 592 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 ADGRE2Q9UHX3 823 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 PCDH7O60245 1069 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 KCNH1O95259 989 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 WNT1P04628 370 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 SLC34A1Q06495 639 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 TRAP1Q12931 704 aaKnown RBP24.59■■□□□ 1.53
CPNE1-205ENST00000401607 IYDQ6PHW0 289 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 METTL4Q8N3J2 472 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 CADM4Q8NFZ8 388 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 OR4E2Q8NGC2 313 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 WDR48Q8TAF3 677 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 PCED1AQ9H1Q7 454 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 OR6C2Q9NZP2 312 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 TAAR2Q9P1P5 351 aa24.59■■□□□ 1.53
CPNE1-205ENST00000401607 C15orf38-AP3S2A0A0A6YYH1 394 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 DCNP07585 359 aaKnown RBP24.58■■□□□ 1.53
CPNE1-205ENST00000401607 ANPEPP15144 967 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 PTX3P26022 381 aaPredicted RBP24.58■■□□□ 1.53
CPNE1-205ENST00000401607 ARPINQ7Z6K5 226 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 PARGQ86W56 976 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 FBXL6Q8N531 539 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 OR2L3Q8NG85 312 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 MS4A8Q9BY19 250 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 MRPS30Q9NP92 439 aaKnown RBP24.58■■□□□ 1.53
CPNE1-205ENST00000401607 SERHLQ9NQF3 203 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 VAPAQ9P0L0 249 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 BCAP29Q9UHQ4 241 aa24.58■■□□□ 1.53
CPNE1-205ENST00000401607 A0A1W2PR77 199 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 ANKDD1BA6NHY2 528 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 DFNA5O60443 496 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 B3GALT4O96024 378 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 CHRM5P08912 532 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-205ENST00000401607 CYP4F2P78329 520 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 ABATP80404 500 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 SELPLGQ14242 412 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 PGS1Q32NB8 556 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 SPATS1Q496A3 300 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 MSRB3Q8IXL7 192 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 OR7A2PQ8NGA2 310 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 CDC26Q8NHZ8 85 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 PATE1Q8WXA2 126 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 MAN2B2Q9Y2E5 1009 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 H3BNX3 289 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 LCMT2O60294 686 aaKnown RBP24.57■■□□□ 1.52
CPNE1-205ENST00000401607 DNAJA2O60884 412 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 KLHL18O94889 574 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 ASMTP46597 345 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 GSK3BP49841 420 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 SESN3P58005 492 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 HKDC1Q2TB90 917 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 PRRT3Q5FWE3 981 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 OR4F3Q6IEY1 312 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 RNF111Q6ZNA4 994 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 ADCK2Q7Z695 626 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 PLD3Q8IV08 490 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 ADGRF3Q8IZF5 1079 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 TWSG1Q9GZX9 223 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 MUTYHQ9UIF7 546 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 SIT1Q9Y3P8 196 aa24.57■■□□□ 1.52
CPNE1-205ENST00000401607 GNG14A0A1W2PPG7 69 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 K7ESF4 209 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 BTN3A3O00478 584 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 OR1F1O43749 312 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 MAOBP27338 520 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 SERPINB1P30740 379 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 PTDSS1P48651 473 aaKnown RBP24.56■■□□□ 1.52
CPNE1-205ENST00000401607 EEFSECP57772 596 aaKnown RBP24.56■■□□□ 1.52
CPNE1-205ENST00000401607 RPL6Q02878 288 aaKnown RBP24.56■■□□□ 1.52
CPNE1-205ENST00000401607 LIPEQ05469 1076 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 DPY19L1Q2PZI1 675 aa24.56■■□□□ 1.52
CPNE1-205ENST00000401607 MSANTD1Q6ZTZ1 278 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms