RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 C21orf140B9A014 251 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 MEN1O00255 615 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 TAF4O00268 1085 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 NRP2O60462 931 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 RPS17P08708 135 aaKnown RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 CD63P08962 238 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 EPORP19235 508 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 SERPINB1P30740 379 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 HNF4AP41235 474 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 STAT5AP42229 794 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 PRKAA2P54646 552 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 HERVK_113P63132 956 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 FAM53BQ14153 422 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 CASP8Q14790 479 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 LIPJQ5W064 366 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 ZNF385CQ66K41 422 aaPredicted RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 PRMT9Q6P2P2 845 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 ZYG11AQ6WRX3 759 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 LRRC69Q6ZNQ3 347 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 TIPARPQ7Z3E1 657 aaKnown RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 SRRM1Q8IYB3 904 aaKnown RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 CACNA2D3Q8IZS8 1091 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 DSELQ8IZU8 1212 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 OR4N4Q8N0Y3 316 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 CSNK1A1LQ8N752 337 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 PHF21BQ96EK2 531 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 ERVK-6Q9BXR3 956 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 IQCGQ9H095 443 aaKnown RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 LHX9Q9NQ69 397 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 TXLNGQ9NUQ3 528 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 GEMIN8Q9NWZ8 242 aaKnown RBP16.87■□□□□ 0.29
CTNS-203ENST00000399306 PCTPQ9UKL6 214 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 PLLPQ9Y342 182 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 ASB1Q9Y576 335 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 ANGPTL3Q9Y5C1 460 aa16.87■□□□□ 0.29
CTNS-203ENST00000399306 FER1L5A0AVI2 2057 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 A0A1B0GX78 115 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 HYKKA2RU49 373 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 DSCR3O14972 297 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 SLC35G6P0C7Q6 338 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 MYZAPP0CAP1 466 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 PIM1P11309 404 aaPredicted RBP16.86■□□□□ 0.29
CTNS-203ENST00000399306 IMPDH1P20839 514 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 EEF1DP29692 281 aaKnown RBP16.86■□□□□ 0.29
CTNS-203ENST00000399306 HPDP32754 393 aaPredicted RBP16.86■□□□□ 0.29
CTNS-203ENST00000399306 BCL6P41182 706 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 UCNP55089 124 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 DNAJB13P59910 316 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 IRF8Q02556 426 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 GTF2H2Q13888 395 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 HIST2H2ACQ16777 129 aaPredicted RBP16.86■□□□□ 0.29
CTNS-203ENST00000399306 NDUFA9Q16795 377 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 C10orf62Q5T681 223 aaPredicted RBP16.86■□□□□ 0.29
CTNS-203ENST00000399306 HIST2H2AA3Q6FI13 130 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 NIPAL1Q6NVV3 410 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 GTF2H2CQ6P1K8 395 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 C16orf46Q6P387 395 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 TMIGD1Q6UXZ0 262 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 VN1R4Q7Z5H5 301 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 ASPGQ86U10 573 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 C4orf33Q8N1A6 199 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 ARHGEF39Q8N4T4 335 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 TEX9Q8N6V9 391 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 L3MBTL4Q8NA19 623 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 SLC38A9Q8NBW4 561 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 GALNT6Q8NCL4 622 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 NT5CQ8TCD5 201 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 ESAMQ96AP7 390 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 CLIP3Q96DZ5 547 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 L3HYPDHQ96EM0 354 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 GBP5Q96PP8 586 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 NTMT1Q9BV86 223 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 VIPAS39Q9H9C1 493 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 CUTCQ9NTM9 273 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 IRAK4Q9NWZ3 460 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 CDC14AQ9UNH5 594 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 STK38LQ9Y2H1 464 aa16.86■□□□□ 0.29
CTNS-203ENST00000399306 G3V2L1 256 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 H3BQF6 201 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 OR1F1O43749 312 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 LCMT2O60294 686 aaKnown RBP16.85■□□□□ 0.29
CTNS-203ENST00000399306 DLX3O60479 287 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 RECKO95980 971 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 NTRK1P04629 796 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 RAB40ALP0C0E4 278 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 AGXTP21549 392 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 GPS2Q13227 327 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 CHIT1Q13231 466 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 DOC2AQ14183 400 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 FBXO48Q5FWF7 155 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 XKR6Q5GH73 641 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 BROXQ5VW32 411 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 GRHL2Q6ISB3 625 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 GOLGA7Q7Z5G4 137 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 HOMEZQ8IX15 550 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 IL22RA1Q8N6P7 574 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 ZNF483Q8TF39 744 aaPredicted RBP16.85■□□□□ 0.29
CTNS-203ENST00000399306 SLC13A3Q8WWT9 602 aa16.85■□□□□ 0.29
CTNS-203ENST00000399306 KIAA1143Q96AT1 154 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms