RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 CXorf40AQ8TE69 158 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 BADQ92934 168 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 MACROD1Q9BQ69 325 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZBP1Q9H171 429 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 THUMPD1Q9NXG2 353 aaKnown RBP10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 VNN3Q9NY84 501 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 SCN5AQ14524 2016 aa10.08□□□□□ -0.8
CPSF1P1-201ENST00000397477 GRXCR1A8MXD5 290 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CTSLP07711 333 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CHRM5P08912 532 aaPredicted RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 HLCSP50747 726 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 MADCAM1Q13477 382 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 DUS1LQ6P1R4 473 aaKnown RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 FAM124AQ86V42 546 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 MMP21Q8N119 569 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CPXM2Q8N436 756 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 LEMD2Q8NC56 503 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 JPH3Q8WXH2 748 aaPredicted RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 LZICQ8WZA0 190 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 RAB8BQ92930 207 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CEP295NLQ96MC4 621 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 APOL4Q9BPW4 351 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLC35A5Q9BS91 424 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 YIPF4Q9BSR8 244 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 RBM38Q9H0Z9 239 aaKnown RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 XKR8Q9H6D3 395 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CAPN10Q9HC96 672 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TAC3Q9UHF0 121 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TBX21Q9UL17 535 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CNTRLQ7Z7A1 2325 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TRBV5-4A0A0C4DH59 114 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 LINC00854A0A1B0GVQ3 168 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 FEZF1A0PJY2 475 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TNFRSF11BO00300 401 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 NUAK1O60285 661 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CCNDBP1O95273 360 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CD22P20273 847 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 ALDH3B2P48448 385 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 SEC13P55735 322 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 VBP1P61758 197 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 PAGE2BQ5JRK9 111 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 ATG9BQ674R7 924 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 KLHL35Q6PF15 583 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 LIPIQ6XZB0 460 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 DCP2Q8IU60 420 aaKnown RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 WDR48Q8TAF3 677 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 OR8D1Q8WZ84 308 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 USP7Q93009 1102 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CPPED1Q9BRF8 314 aaPredicted RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 C11orf49Q9H6J7 331 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 RDH14Q9HBH5 336 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TIMMDC1Q9NPL8 285 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 INSL6Q9Y581 213 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 H3BN98 237 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 NADKO95544 446 aaPredicted RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 MPP7Q5T2T1 576 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF852Q6ZMS4 543 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 SLCO6A1Q86UG4 719 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 RNF130Q86XS8 419 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 YAF2Q8IY57 180 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 NUS1Q96E22 293 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 DUS3LQ96G46 650 aaKnown RBP10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 SAMD11Q96NU1 681 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 EPB41L1Q9H4G0 881 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 PLGRKTQ9HBL7 147 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 DUSP12Q9UNI6 340 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 TPRKBQ9Y3C4 175 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 CCL27Q9Y4X3 112 aa10.07□□□□□ -0.8
CPSF1P1-201ENST00000397477 PTNP21246 168 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 FUT4P22083 530 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 CARTPTQ16568 116 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 CDKN3Q16667 212 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 CTU2Q2VPK5 515 aaKnown RBP10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZDHHC20Q5W0Z9 365 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 ANKRD33Q7Z3H0 272 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 NPAS3Q8IXF0 933 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 RIMKLAQ8IXN7 391 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 C11orf65Q8NCR3 313 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF480Q8WV37 535 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 NXPE3Q969Y0 559 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 HHIPL1Q96JK4 782 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 OSBPL10Q9BXB5 764 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZCCHC2Q9C0B9 1178 aaKnown RBP10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 C6orf62Q9GZU0 229 aaPredicted RBP10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 CCDC177Q9NQR7 707 aaPredicted RBP10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 TM7SF3Q9NS93 570 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 STOML2Q9UJZ1 356 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 PNMA8CA0A1B0GUJ8 204 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 TTC36A6NLP5 189 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 H7BY64 318 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 NDUFS2O75306 463 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 DBTP11182 482 aaKnown RBP10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 ZNF30P17039 623 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 IMPA1P29218 277 aa10.06□□□□□ -0.8
CPSF1P1-201ENST00000397477 MANFP55145 182 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms