RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 TCRBV7S2A1N4TA0A589 114 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 SOWAHDA6NJG2 315 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF839A8K0R7 811 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 H3BMM5 538 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 PFDN6O15212 129 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 FOXS1O43638 330 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 LIASO43766 372 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 SLC19A2O60779 497 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 IFNB1P01574 187 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 APRTP07741 180 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ERGP11308 486 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ESRRAP11474 423 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 EZRP15311 586 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 SSTR2P30874 369 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 RPA3P35244 121 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 BDKRB1P46663 353 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ADARP55265 1226 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 YBX1P67809 324 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ABATP80404 500 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 EEF1A2Q05639 463 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 FASTKQ14296 549 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 GBX1Q14549 363 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 PCOLCEQ15113 449 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 OASLQ15646 514 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 NDUFA9Q16795 377 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 HKDC1Q2TB90 917 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 FAAH2Q6GMR7 532 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 HIBCHQ6NVY1 386 aaPredicted RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 H3F3CQ6NXT2 135 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 SLCO4C1Q6ZQN7 724 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ARHGEF39Q8N4T4 335 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 RNF214Q8ND24 703 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ADAMTS18Q8TE60 1221 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 BIRC8Q96P09 236 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 CYTH2Q99418 400 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 IL22Q9GZX6 179 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 DRC3Q9H069 523 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 TREX1Q9NSU2 369 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 MKL2Q9ULH7 1088 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 RUVBL1Q9Y265 456 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 DRG1Q9Y295 367 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF835Q9Y2P0 537 aa8.29□□□□□ -1.08
CAPN3-208ENST00000397204 REXO2Q9Y3B8 237 aaKnown RBP8.29□□□□□ -1.08
CAPN3-208ENST00000397204 A0A0A6YYC8 382 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 KRT87PA6NCN2 255 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 A8MUI8 341 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 I3L1I5 382 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 MYO1CO00159 1063 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 TTI1O43156 1089 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 NRP2O60462 931 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 PSIP1O75475 530 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 CCNDBP1O95273 360 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 F10P00742 488 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ESR1P03372 595 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 CELA2AP08217 269 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 C8orf89P0DMQ9 161 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 CHRM3P20309 590 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 FMO4P31512 558 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 AVPR1BP47901 424 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 EIF3BP55884 814 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF33BQ06732 778 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 KIF5AQ12840 1032 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF766Q5HY98 468 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ACER2Q5QJU3 275 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ICE2Q659A1 982 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 PLAG1Q6DJT9 500 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ZNF425Q6IV72 752 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 MRNIPQ6NTE8 343 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 SUSD1Q6UWL2 747 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 C4orf22Q6V702 233 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 Q6ZPB1 254 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 CPEB2Q7Z5Q1 589 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 SPPL2CQ8IUH8 684 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 TXLNBQ8N3L3 684 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 ATG4AQ8WYN0 398 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 MTFMTQ96DP5 389 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 HES6Q96HZ4 224 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 EBNA1BP2Q99848 306 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 SPOCK3Q9BQ16 436 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 FAM114A2Q9NRY5 505 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 BFARQ9NZS9 450 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 PAK5Q9P286 719 aa8.28□□□□□ -1.08
CAPN3-208ENST00000397204 C19orf25Q9UFG5 118 aaPredicted RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 RUVBL2Q9Y230 463 aaKnown RBP8.28□□□□□ -1.08
CAPN3-208ENST00000397204 KCNE1BA0A087WTH5 132 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 IGKV1-8A0A0C4DH67 115 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 ARHGEF33A8MVX0 844 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 E7ENX8 843 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 H0YIG0 161 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 FFAR3O14843 346 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 GPR42O15529 346 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 WISP2O76076 250 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 VAPBO95292 243 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 CLDN14O95500 239 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 FTCDO95954 541 aa8.27□□□□□ -1.09
CAPN3-208ENST00000397204 CATP04040 527 aaKnown RBP8.27□□□□□ -1.09
CAPN3-208ENST00000397204 SNRPB2P08579 225 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms