RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 HORMAD1Q86X24 394 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 SYTL1Q8IYJ3 562 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CHCHD4Q8N4Q1 142 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 FCRL1Q96LA6 429 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 BBS2Q9BXC9 721 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 PCDHGA2Q9Y5H1 932 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 DLGAP3O95886 979 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 TGM4P49221 684 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 RGS4P49798 205 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 RAE1P78406 368 aaKnown RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 MTA1Q13330 715 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 BOP1Q14137 746 aaKnown RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 NAGSQ8N159 534 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CACTIN-AS1Q8N1I8 211 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ZNF675Q8TD23 568 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CMTM7Q96FZ5 175 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 TBC1D24Q9ULP9 559 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CCND3P30281 292 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 SERPINB1P30740 379 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 GPNMBQ14956 572 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 TBCEQ15813 527 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 ATP13A5Q4VNC0 1218 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ZMAT1Q5H9K5 638 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 AKAP14Q86UN6 197 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ATCAYQ86WG3 371 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 NXPE1Q8N323 547 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 NEDD4LQ96PU5 975 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 MTERF1Q99551 399 aaKnown RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 GLYATL1P3A0A0U1RQE8 302 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CLCA1A8K7I4 914 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 C9P02748 559 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 NTRK1P04629 796 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 HLA-EP13747 358 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 GGT2P36268 569 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ZNF181Q2M3W8 571 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 CCDC92Q53HC0 331 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 LRRC73Q5JTD7 316 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 L3MBTL4Q8NA19 623 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 OR4C15Q8NGM1 316 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
NUP98-204ENST00000397004 ELOVL6Q9H5J4 265 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 KIF17Q9P2E2 1029 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 IFT52Q9Y366 437 aa13.45□□□□□ -0.26
NUP98-204ENST00000397004 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 RECKO95980 971 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 KRT6AP02538 564 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 KRT6BP04259 564 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 KRT6CP48668 564 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 RGS6P49758 472 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 PFN3P60673 137 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 CYP2U1Q7Z449 544 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 OR9Q2Q8NGE9 314 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 CHCHD6Q9BRQ6 235 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 REEP1Q9H902 201 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 TPT1P8Q9HAU6 139 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 ERVK13-1Q9NX77 482 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 OR6C75A6NL08 312 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 GABRR3A8MPY1 467 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 FAM47E-STBD1D6RA91 191 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 HAT1O14929 419 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 TBL1XO60907 577 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 MTX2O75431 263 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 EOMESO95936 686 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 PRPS2P11908 318 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 TM4SF4P48230 202 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 TMEM150AQ86TG1 271 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 DNAJB8Q8NHS0 232 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 CAPSLQ8WWF8 208 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 IPCEF1Q8WWN9 437 aaPredicted RBP13.44□□□□□ -0.26
NUP98-204ENST00000397004 TRMT61AQ96FX7 289 aaKnown RBP13.44□□□□□ -0.26
NUP98-204ENST00000397004 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 ATP11BQ9Y2G3 1177 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 ISPDA4D126 451 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 TAF4O00268 1085 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 LHCGRP22888 699 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 SSX1Q16384 188 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
NUP98-204ENST00000397004 BARHL1Q9BZE3 327 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 NACA2Q9H009 215 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 CCNB1IP1Q9NPC3 277 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 PLCXD1Q9NUJ7 323 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 FZD4Q9ULV1 537 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 PCDHGB6Q9Y5F9 930 aa13.44□□□□□ -0.26
NUP98-204ENST00000397004 POU2F1P14859 743 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 PIK3CBP42338 1070 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 HSPA14Q0VDF9 509 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 FOXD4Q12950 439 aaPredicted RBP13.43□□□□□ -0.26
NUP98-204ENST00000397004 DGKKQ5KSL6 1271 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 PNCKQ6P2M8 343 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 FUT10Q6P4F1 479 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ELMOD1Q8N336 334 aa13.43□□□□□ -0.26
NUP98-204ENST00000397004 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms