RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 HRH2P25021 359 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 CXCR2P25025 360 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 GRK3P35626 688 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
GAPDH-203ENST00000396858 SCTRP47872 440 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 ACADVLP49748 655 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 RPS13P62277 151 aaKnown RBP13.5□□□□□ -0.25
GAPDH-203ENST00000396858 PHEXP78562 749 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 CSTF3Q12996 717 aaKnown RBP13.5□□□□□ -0.25
GAPDH-203ENST00000396858 TUBB3Q13509 450 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 NAA25Q14CX7 972 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 IMPG1Q17R60 797 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 NXNQ6DKJ4 435 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 ACAD11Q709F0 780 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 RNF44Q7L0R7 432 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 ASCL5Q7RTU5 278 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 TMPRSS9Q7Z410 1059 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 CHCHD4Q8N4Q1 142 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 CCDC197Q8NCU1 140 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 UBE2E3Q969T4 207 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 TUBGCP3Q96CW5 907 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 ZDHHC12Q96GR4 267 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 MAELQ96JY0 434 aaKnown RBP13.5□□□□□ -0.25
GAPDH-203ENST00000396858 MARK4Q96L34 752 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 TRAPPC9Q96Q05 1148 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 CD180Q99467 661 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 RAB33BQ9H082 229 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 TCF7L2Q9NQB0 619 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 SOHLH2Q9NX45 425 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 EPHA6Q9UF33 1036 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 PCDHGA4Q9Y5G9 962 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 KLK4Q9Y5K2 254 aa13.5□□□□□ -0.25
GAPDH-203ENST00000396858 IGHV5-51A0A0C4DH38 117 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 A0A0J9YVX5 310 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 MAGEB17A8MXT2 336 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 PROB1E7EW31 1015 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 TNFSF14O43557 240 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
GAPDH-203ENST00000396858 ETHE1O95571 254 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 C9P02748 559 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 SERPIND1P05546 499 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RPS15AP62244 130 aaKnown RBP13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RPL38P63173 70 aaKnown RBP13.49□□□□□ -0.25
GAPDH-203ENST00000396858 NHLH1Q02575 133 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 GABPB1Q06547 395 aaPredicted RBP13.49□□□□□ -0.25
GAPDH-203ENST00000396858 GALNTL6Q49A17 601 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 CACHD1Q5VU97 1274 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 TMEM198Q66K66 360 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RNF165Q6ZSG1 346 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 CACNA2D3Q8IZS8 1091 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 TBC1D19Q8N5T2 526 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 MFSD9Q8NBP5 474 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 SEC16BQ96JE7 1060 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RILPQ96NA2 401 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 LRRN3Q9H3W5 708 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 NT5DC2Q9H857 520 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 C1GALT1Q9NS00 363 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RIC8BQ9NVN3 520 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 RAPGEFL1Q9UHV5 662 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 SLC12A4Q9UP95 1085 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 ARL2BPQ9Y2Y0 163 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 CCL27Q9Y4X3 112 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 ASXL3Q9C0F0 2248 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
GAPDH-203ENST00000396858 ANKDD1BA6NHY2 528 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 D6RAR5 112 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 SLC28A1O00337 649 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 LSM1O15116 133 aaKnown RBP13.48□□□□□ -0.25
GAPDH-203ENST00000396858 P2RX6O15547 441 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 NDUFS4O43181 175 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 RGS14O43566 566 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 CBFA2T3O75081 653 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 PEX11AO75192 247 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 ACP1P24666 158 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 SEPHS1P49903 392 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 TERF2Q15554 542 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 LSM12Q3MHD2 195 aaKnown RBP13.48□□□□□ -0.25
GAPDH-203ENST00000396858 CCDC157Q569K6 752 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 STPG1Q5TH74 334 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 FRMPD2BQ6IN97 320 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 WDR74Q6RFH5 385 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-203ENST00000396858 Q6ZSR9 355 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 TRIM46Q7Z4K8 759 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 PRSS42Q7Z5A4 293 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 VN1R4Q7Z5H5 301 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 STON2Q8WXE9 905 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 CATSPER2Q96P56 530 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 ZFYVE21Q9BQ24 234 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 MACROD1Q9BQ69 325 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 C1orf50Q9BV19 199 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 MS4A8Q9BY19 250 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 PITHD1Q9GZP4 211 aaPredicted RBP13.48□□□□□ -0.25
GAPDH-203ENST00000396858 RHBGQ9H310 441 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 OR51B5Q9H339 312 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 AKTIPQ9H8T0 292 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 FAM60AQ9NP50 221 aa13.48□□□□□ -0.25
GAPDH-203ENST00000396858 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms