RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 COLQQ9Y215 455 aaPredicted RBP14.4□□□□□ -0.1
CBX3-202ENST00000396386 TSC22D4Q9Y3Q8 395 aa14.4□□□□□ -0.1
CBX3-202ENST00000396386 OR1A2Q9Y585 309 aa14.4□□□□□ -0.1
CBX3-202ENST00000396386 CLIC1O00299 241 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 DLGAP1O14490 977 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 PRSS23O95084 383 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 CPSF4O95639 269 aaKnown RBP14.39□□□□□ -0.11
CBX3-202ENST00000396386 LAMP1P11279 417 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 NTSR1P30989 418 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 MTHFRP42898 656 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 MEF2AQ02078 507 aaPredicted RBP14.39□□□□□ -0.11
CBX3-202ENST00000396386 SLC14A1Q13336 389 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 FGL2Q14314 439 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 PON2Q15165 354 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 ANKRD26P1Q6NSI1 321 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 IYDQ6PHW0 289 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 COMMD6Q7Z4G1 85 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 CLECL1Q8IZS7 167 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 KRT78Q8N1N4 520 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 C1QTNF7Q9BXJ2 289 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 YIPF3Q9GZM5 350 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 SPNS1Q9H2V7 528 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 FBRSQ9HAH7 460 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 FBXL12Q9NXK8 326 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 SMPD3Q9NY59 655 aaPredicted RBP14.39□□□□□ -0.11
CBX3-202ENST00000396386 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
CBX3-202ENST00000396386 MAP3K13O43283 966 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PLRG1O43660 514 aaKnown RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 PRKD3O94806 890 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 SERPINA1P01009 418 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ENGP17813 658 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 IL1RNP18510 177 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TRIM23P36406 574 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 RPL3P39023 403 aaKnown RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 DMPKQ09013 629 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 LRRC74AQ0VAA2 488 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 MERTKQ12866 999 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 SGCGQ13326 291 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 APOFQ13790 326 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 NKG7Q16617 165 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 SDE2Q6IQ49 451 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 KIAA1211LQ6NV74 962 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ERICH5Q6P6B1 374 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ZNF621Q6ZSS3 439 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 GPR155Q7Z3F1 870 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 C17orf64Q86WR6 236 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 VPS37AQ8NEZ2 397 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 GABRG3Q99928 467 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 C1QTNF2Q9BXJ5 285 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PELI2Q9HAT8 420 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 DNAJB9Q9UBS3 223 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ATP6V1HQ9UI12 483 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ACSL5Q9ULC5 683 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PRR23AA6NEV1 266 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 GABRR3A8MPY1 467 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PGM3O95394 542 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 CLPTM1O96005 669 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TGFB1P01137 390 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 DNTTP04053 509 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 IDSP22304 550 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PPIBP23284 216 aaKnown RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 MYF6P23409 242 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 CLCNKAP51800 687 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 TMIGD1Q6UXZ0 262 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 ARMCX6Q7L4S7 300 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 FAM47BQ8NA70 645 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 MAGEE2Q8TD90 523 aaPredicted RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 KLK6Q92876 244 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TMBIM1Q969X1 311 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 FAM131CQ96AQ9 280 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 SDCCAG3Q96C92 435 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 COQ8BQ96D53 544 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TIMM29Q9BSF4 260 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 BHLHE41Q9C0J9 482 aaPredicted RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 PCBD2Q9H0N5 130 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 REEP4Q9H6H4 257 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 NTN4Q9HB63 628 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 MYNNQ9NPC7 610 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 CD320Q9NPF0 282 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 TAC3Q9UHF0 121 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 CORO2BQ9UQ03 480 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 BTBD3Q9Y2F9 522 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 PCDHB11Q9Y5F2 797 aa14.38□□□□□ -0.11
CBX3-202ENST00000396386 CFAP20Q9Y6A4 193 aaKnown RBP14.38□□□□□ -0.11
CBX3-202ENST00000396386 MYOCOSA0A1B0GUC4 107 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 A0A1W2PQU0 124 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 UPK1AO00322 258 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 PLOD2O00469 737 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 RNGTTO60942 597 aaKnown RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 CCNDBP1O95273 360 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
CBX3-202ENST00000396386 ACP5P13686 325 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 GPX2P18283 190 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 PAX7P23759 505 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 SLC36A3Q495N2 470 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 TMEM259Q4ZIN3 620 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 TMEM196Q5HYL7 178 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 CPZQ66K79 652 aa14.37□□□□□ -0.11
CBX3-202ENST00000396386 ZNF551Q7Z340 670 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms