RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KCNE1BA0A087WTH5 132 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 OR2W5A6NFC9 320 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 PRPF4O43172 522 aaKnown RBP eCLIP17.35■□□□□ 0.37
FXN-203ENST00000396366 CBX6O95503 412 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 SAT1P21673 171 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 RPS15AP62244 130 aaKnown RBP17.35■□□□□ 0.37
FXN-203ENST00000396366 SP140Q13342 867 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 FAM53BQ14153 422 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 IRAK1BP1Q5VVH5 260 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 GALNT7Q86SF2 657 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 KCT2Q8NC54 265 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 PSMF1Q92530 271 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 TM4SF19Q96DZ7 209 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 PDLIM2Q96JY6 352 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 KRT12Q99456 494 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 ARL15Q9NXU5 204 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 MKL2Q9ULH7 1088 aa17.35■□□□□ 0.37
FXN-203ENST00000396366 NOVA2Q9UNW9 492 aaKnown RBP17.35■□□□□ 0.37
FXN-203ENST00000396366 NBPF19A0A087WUL8 3843 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 IGHV1-45A0A0A0MS14 117 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 NSG1A0A0A6YYJ2 146 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 SGK494L7N484 410 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 PIAS1O75925 651 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 GUCA1CO95843 209 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIST1H2AGP0C0S8 130 aaPredicted RBP17.34■□□□□ 0.37
FXN-203ENST00000396366 IL1RNP18510 177 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIST1H2ADP20671 130 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HRH2P25021 359 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 CXCR2P25025 360 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 RPL21P46778 160 aaKnown RBP17.34■□□□□ 0.37
FXN-203ENST00000396366 AVPR1BP47901 424 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 ARL4CP56559 192 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 PDIA2Q13087 525 aaKnown RBP17.34■□□□□ 0.37
FXN-203ENST00000396366 NDUFA9Q16795 377 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIST2H2BCQ6DN03 193 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 TMEM214Q6NUQ4 689 aaKnown RBP17.34■□□□□ 0.37
FXN-203ENST00000396366 LCTLQ6UWM7 567 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 SLC26A11Q86WA9 606 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 C17orf64Q86WR6 236 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 KBTBD2Q8IY47 623 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 ZCCHC10Q8TBK6 192 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 MOCOSQ96EN8 888 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 SNF8Q96H20 258 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 VPS50Q96JG6 964 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIST1H2AHQ96KK5 128 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 CNDP1Q96KN2 507 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 OR4K3Q96R72 315 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIST1H2AJQ99878 128 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 H2AFJQ9BTM1 129 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 PCBD2Q9H0N5 130 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 C14orf105Q9NVL8 296 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HCN3Q9P1Z3 774 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 PTGFRNQ9P2B2 879 aa17.34■□□□□ 0.37
FXN-203ENST00000396366 HIVEP3Q5T1R4 2406 aa17.33■□□□□ 0.37
FXN-203ENST00000396366 EFCAB8A8MWE9 144 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 BMP10O95393 424 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 PRR35P0CG20 571 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 VARSP26640 1264 aaKnown RBP17.33■□□□□ 0.36
FXN-203ENST00000396366 MFAP5Q13361 173 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 ZNF460Q14592 562 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 PCOLCEQ15113 449 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 CAPN13Q6MZZ7 669 aaPredicted RBP17.33■□□□□ 0.36
FXN-203ENST00000396366 FAM45BPQ6NSW5 357 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 ISLR2Q6UXK2 745 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 PDSS2Q86YH6 399 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 SIRT6Q8N6T7 355 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 FBXO36Q8NEA4 188 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 FAM45AQ8TCE6 357 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 BRIX1Q8TDN6 353 aaKnown RBP17.33■□□□□ 0.36
FXN-203ENST00000396366 PPP4R1Q8TF05 950 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 SLC13A3Q8WWT9 602 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 LRRC39Q96DD0 335 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 RUNDC3BQ96NL0 473 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 BARD1Q99728 777 aaKnown RBP17.33■□□□□ 0.36
FXN-203ENST00000396366 SLC29A3Q9BZD2 475 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 LRRC4CQ9HCJ2 640 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 PLA2G3Q9NZ20 509 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 ICE1Q9Y2F5 2266 aa17.33■□□□□ 0.36
FXN-203ENST00000396366 IGHV3-20A0A0C4DH32 117 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 CCDC188H7C350 402 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 CDC7O00311 574 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 DNAJB6O75190 326 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 NSA2O95478 260 aaKnown RBP17.32■□□□□ 0.36
FXN-203ENST00000396366 GP1BBP13224 206 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 PAFAH1B1P43034 410 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 MGAT5Q09328 741 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 CATSPEREQ5SY80 951 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 B3GNTL1Q67FW5 361 aaPredicted RBP17.32■□□□□ 0.36
FXN-203ENST00000396366 DUPD1Q68J44 220 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 TMEM205Q6UW68 189 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 SBSNQ6UWP8 590 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 CAPN12Q6ZSI9 719 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 STRA8Q7Z7C7 330 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 ASPGQ86U10 573 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 MFSD9Q8NBP5 474 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 ZNF740Q8NDX6 193 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 OR56A3Q8NH54 315 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 OR51Q1Q8NH59 317 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 LMF1Q96S06 567 aa17.32■□□□□ 0.36
FXN-203ENST00000396366 VN1R1Q9GZP7 353 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms