RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TRBC2A0A5B9 178 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 K7EPI3 171 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 KATNA1O75449 491 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 C1GALT1C1LP0DN25 315 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 ARSFP54793 590 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 ALDH18A1P54886 795 aaKnown RBP18.99■□□□□ 0.63
SNCA-203ENST00000394986 SLBPQ14493 270 aaKnown RBP eCLIP18.99■□□□□ 0.63
SNCA-203ENST00000394986 ARHGAP40Q5TG30 622 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 FAM69BQ5VUD6 431 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 C4orf33Q8N1A6 199 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 ARHGEF39Q8N4T4 335 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 TEX9Q8N6V9 391 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 ANKRD53Q8N9V6 530 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 MOCOSQ96EN8 888 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 GEMIN8Q9NWZ8 242 aaKnown RBP18.99■□□□□ 0.63
SNCA-203ENST00000394986 GPRC5BQ9NZH0 403 aa18.99■□□□□ 0.63
SNCA-203ENST00000394986 MRPS2Q9Y399 296 aaKnown RBP18.99■□□□□ 0.63
SNCA-203ENST00000394986 PCM1Q15154 2024 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 KCNE1BA0A087WTH5 132 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 DSCR3O14972 297 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 CAPN1P07384 714 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 SCTRP47872 440 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 OR1D4P47884 311 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 UCNP55089 124 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 FOXL2P58012 376 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 CYP4F2P78329 520 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 RBBP5Q15291 538 aaKnown RBP18.98■□□□□ 0.63
SNCA-203ENST00000394986 ATG9BQ674R7 924 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 ASPGQ86U10 573 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 PROKR1Q8TCW9 393 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 THAP11Q96EK4 314 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 AIF1LQ9BQI0 150 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 SLC22A11Q9NSA0 550 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 MAU2Q9Y6X3 613 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 KMT2BQ9UMN6 2715 aaPredicted RBP18.98■□□□□ 0.63
SNCA-203ENST00000394986 ITPR1Q14643 2758 aa18.98■□□□□ 0.63
SNCA-203ENST00000394986 K7ENP7 123 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 CLGNO14967 610 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 SMIM24O75264 130 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 SERPIND1P05546 499 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 CD22P20273 847 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 AGXTP21549 392 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 EEF1DP29692 281 aaKnown RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 DCDP81605 110 aaKnown RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 VAC14Q08AM6 782 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 DOC2AQ14183 400 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 FAM214AQ32MH5 1076 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 NKAIN1Q4KMZ8 207 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 XKR6Q5GH73 641 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 ATP1A1-AS1Q5TC04 95 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 YOD1Q5VVQ6 348 aaPredicted RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 INO80CQ6PI98 192 aaPredicted RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 TMEM151BQ8IW70 566 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 ENDOVQ8N8Q3 282 aaKnown RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 KCT2Q8NC54 265 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 ZCCHC10Q8TBK6 192 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 SLC13A3Q8WWT9 602 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 STARD8Q92502 1023 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 TM4SF19Q96DZ7 209 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 SARGQ9BW04 601 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 CAPS2Q9BXY5 557 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 C12orf65Q9H3J6 166 aaKnown RBP18.97■□□□□ 0.63
SNCA-203ENST00000394986 ACTL8Q9H568 366 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 LGALS13Q9UHV8 139 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 EMCNQ9ULC0 261 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 HEATR5BQ9P2D3 2071 aa18.97■□□□□ 0.63
SNCA-203ENST00000394986 A8MT66 165 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 C21orf140B9A014 251 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 NDUFS4O43181 175 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 GSTA1P08263 222 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 KRT4P19013 534 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 ZNF844Q08AG5 666 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 CHIT1Q13231 466 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 PCBP2Q15366 365 aaKnown RBP eCLIP18.96■□□□□ 0.63
SNCA-203ENST00000394986 MUM1Q2TAK8 710 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 MLIPQ5VWP3 458 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 ADNP2Q6IQ32 1131 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 RPS27LQ71UM5 84 aaKnown RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 COX15Q7KZN9 410 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 PRSS41Q7RTY9 318 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.96■□□□□ 0.63
SNCA-203ENST00000394986 CNPY4Q8N129 248 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 RIBC1Q8N443 379 aaPredicted RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 SLC45A3Q96JT2 553 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 DPH2Q9BQC3 489 aaPredicted RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 ROPN1BQ9BZX4 212 aaPredicted RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 PRORYQ9H606 182 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 ROPN1Q9HAT0 212 aaPredicted RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 ACSS2Q9NR19 701 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 IFT80Q9P2H3 777 aaPredicted RBP18.96■□□□□ 0.63
SNCA-203ENST00000394986 ANGPTL3Q9Y5C1 460 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 PTPRQQ9UMZ3 2332 aa18.96■□□□□ 0.63
SNCA-203ENST00000394986 E2F3O00716 465 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 NKX2-8O15522 239 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 CNOT3O75175 753 aaKnown RBP18.95■□□□□ 0.62
SNCA-203ENST00000394986 GLRA3O75311 464 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 PRKAR1AP10644 381 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 EPB42P16452 691 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 IRF8Q02556 426 aa18.95■□□□□ 0.62
SNCA-203ENST00000394986 NCF4Q15080 339 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms