RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 GBAP04062 536 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PGRP06401 933 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CHRM5P08912 532 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 ACPPP15309 386 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 PCSK2P16519 638 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 BCKDHBP21953 392 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CMPK1P30085 196 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 GRK3P35626 688 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 RACK1P63244 317 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 CSNK1G2P78368 415 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 REEP5Q00765 189 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 FOXM1Q08050 763 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 FLOT2Q14254 428 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 RCN1Q15293 331 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 MINDY1Q8N5J2 469 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 ANKRD53Q8N9V6 530 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 FAM46DQ8NEK8 389 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 OR10G6Q8NH81 332 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 SLC26A7Q8TE54 656 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 METTL2AQ96IZ6 378 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 FCRL1Q96LA6 429 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 GPATCH1Q9BRR8 931 aaKnown RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 DPH7Q9BTV6 452 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 TRIM8Q9BZR9 551 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 RNPEPL1Q9HAU8 725 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 GPR27Q9NS67 375 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 OR6C2Q9NZP2 312 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 TMEM181Q9P2C4 612 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 CPNE7Q9UBL6 633 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 NKX1-2Q9UD57 310 aaPredicted RBP8.3□□□□□ -1.08
TDP1-203ENST00000393454 ADGRE2Q9UHX3 823 aa8.3□□□□□ -1.08
TDP1-203ENST00000393454 HEATR5BQ9P2D3 2071 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 OR5K4A6NMS3 321 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 K7ESF4 209 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 KCNH1O95259 989 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PDGFBP01127 241 aaPredicted RBP8.29□□□□□ -1.08
TDP1-203ENST00000393454 COX7A2P14406 83 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PRPS1L1P21108 318 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PEBP1P30086 187 aaKnown RBP8.29□□□□□ -1.08
TDP1-203ENST00000393454 TIA1P31483 386 aaKnown RBP eCLIP8.29□□□□□ -1.08
TDP1-203ENST00000393454 ASMTP46597 345 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 RAE1P78406 368 aaKnown RBP8.29□□□□□ -1.08
TDP1-203ENST00000393454 ABATP80404 500 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 ZXDAP98168 799 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 DMWDQ09019 674 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PWP1Q13610 501 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 CCNIQ14094 377 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 GPR18Q14330 331 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 HKDC1Q2TB90 917 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 C8orf82Q6P1X6 216 aaPredicted RBP8.29□□□□□ -1.08
TDP1-203ENST00000393454 TSSK4Q6SA08 328 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 COMMD6Q7Z4G1 85 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 SFTPA2Q8IWL1 248 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 SLC15A3Q8IY34 581 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 DPP10Q8N608 796 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 OR2L3Q8NG85 312 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 OR4K1Q8NGD4 311 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 WDR48Q8TAF3 677 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PPM1MQ96MI6 270 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 PITHD1Q9GZP4 211 aaPredicted RBP8.29□□□□□ -1.08
TDP1-203ENST00000393454 RHBGQ9H310 441 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 TM9SF3Q9HD45 589 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 CD320Q9NPF0 282 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 TMEM184CQ9NVA4 438 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 BCAP29Q9UHQ4 241 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 DOLKQ9UPQ8 538 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 KLHL20Q9Y2M5 609 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 TSC22D4Q9Y3Q8 395 aa8.29□□□□□ -1.08
TDP1-203ENST00000393454 CROCCQ5TZA2 2017 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 IGKV1-8A0A0C4DH67 115 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIR2DS5A0A0G2JLQ3 304 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 A0A0G2JNG1 304 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 A0A1W2PR77 199 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 GSAPA4D1B5 854 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 OR6C74A6NCV1 312 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PRORSD1PA6NEY8 169 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 B4DGG1 531 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIR2DS3K7RE56 304 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 FXYD1O00168 92 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 BTN3A3O00478 584 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 PRICKLE3O43900 615 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 LCMT2O60294 686 aaKnown RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 STAMBPO95630 424 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 BAG2O95816 211 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NPPAP01160 153 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 STATHP02808 62 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KLK1P06870 262 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 POLR2CP19387 275 aaPredicted RBP8.28□□□□□ -1.08
TDP1-203ENST00000393454 SLC6A2P23975 617 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 HPCAL1P37235 193 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 SESN3P58005 492 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 MS4A2Q01362 244 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIR2DS5Q14953 304 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 ELOCQ15369 112 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 RABL3Q5HYI8 236 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 KIAA1614Q5VZ46 1190 aa8.28□□□□□ -1.08
TDP1-203ENST00000393454 NANOGP8Q6NSW7 305 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms