RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 TACR1P25103 407 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 RRM2P31350 389 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 VIPR1P32241 457 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 CBSP35520 551 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 EMP3P54852 163 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 TXNL4AP83876 142 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 MADCAM1Q13477 382 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 NUDT18Q6ZVK8 323 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 PIWIL3Q7Z3Z3 882 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 CCDC28AQ8IWP9 274 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 CLECL1Q8IZS7 167 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 C11orf65Q8NCR3 313 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 LILRB4Q8NHJ6 448 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 PHF10Q8WUB8 498 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 RAB2BQ8WUD1 216 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 TMEM246Q9BRR3 403 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 NLNQ9BYT8 704 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ACPTQ9BZG2 426 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 MTIF3Q9H2K0 278 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 TPT1P8Q9HAU6 139 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 GPRC5BQ9NZH0 403 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 PSME2Q9UL46 239 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 LOC100130705A0A1B0GUX0 176 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ERAL1O75616 437 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 FGBP02675 491 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 PSMD8P48556 350 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 CDH12P55289 794 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 RPS13P62277 151 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 PON2Q15165 354 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ANXA8L1Q5VT79 327 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 FAM180BQ6P0A1 224 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ZNF605Q86T29 641 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ARMC8Q8IUR7 673 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 GALNT12Q8IXK2 581 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 SVOPLQ8N434 492 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 TRUB1Q8WWH5 349 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 PYURFQ96I23 114 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 RAD18Q9NS91 495 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 IMP3Q9NV31 184 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 IL36AQ9UHA7 158 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 PTBP2Q9UKA9 531 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 PLAGL1Q9UM63 463 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 KLHL20Q9Y2M5 609 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 WBP11Q9Y2W2 641 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 BRCA1P38398 1863 aaKnown RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 H3BNC9 293 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 MMP20O60882 483 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 RHOP08100 348 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 GGT1P19440 569 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 OPRL1P41146 370 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 RFX3P48380 749 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ABHD18Q0P651 414 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 TMEM115Q12893 351 aaPredicted RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 NFATC3Q12968 1075 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 TOP3AQ13472 1001 aaPredicted RBP10.2□□□□□ -0.78
CALD1-203ENST00000393118 VTCN1Q7Z7D3 282 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 NETO1Q8TDF5 533 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 FRS2Q8WU20 508 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 P2RY13Q9BPV8 354 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 CWH43Q9H720 699 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 SPHK2Q9NRA0 654 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 OLAHQ9NV23 265 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 EHD3Q9NZN3 535 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 OGDHLQ9ULD0 1010 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 ZNF451Q9Y4E5 1061 aa10.2□□□□□ -0.78
CALD1-203ENST00000393118 H0YJX3 145 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 PLK4O00444 970 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ADH1CP00326 375 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 STATHP02808 62 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 F11P03951 625 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ASMTP46597 345 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 DOC2AQ14183 400 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 OR2T5Q6IEZ7 315 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 MACC1Q6ZN28 852 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 PDPRQ8NCN5 879 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 OR2T29Q8NH02 315 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 CNIH3Q8TBE1 160 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 PHF21AQ96BD5 680 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 PPP1R16AQ96I34 528 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 SEZ6LQ9BYH1 1024 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 ZNF225Q9UK10 706 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 LOC285556D6RIA3 1793 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TNFRSF11BO00300 401 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 CPNE3O75131 537 aaKnown RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 VNN2O95498 520 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TSPAN12O95859 305 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 PCCBP05166 539 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 MYF6P23409 242 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 MANFP55145 182 aaKnown RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 ALDH6A1Q02252 535 aaKnown RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 COLEC12Q5KU26 742 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 TRIM40Q6P9F5 258 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 KRT78Q8N1N4 520 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 VANGL1Q8TAA9 524 aaPredicted RBP10.19□□□□□ -0.78
CALD1-203ENST00000393118 GTF2H4Q92759 462 aa10.19□□□□□ -0.78
CALD1-203ENST00000393118 GTPBP3Q969Y2 492 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms