RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 AGAP6Q5VW22 663 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 LYPLAL1Q5VWZ2 237 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 OR2T5Q6IEZ7 315 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF544Q6NX49 715 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 DPY19L3Q6ZPD9 716 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 TPRG1Q6ZUI0 275 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 USP45Q70EL2 814 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 KIAA0907Q7Z7F0 614 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 SERPINA9Q86WD7 417 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ZDHHC21Q8IVQ6 265 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CCDC103Q8IW40 242 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 MSRB3Q8IXL7 192 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 OR2T29Q8NH02 315 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CD200R1Q8TD46 325 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ING5Q8WYH8 240 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 AGAP4Q96P64 663 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 DPY30Q9C005 99 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 IKZF5Q9H5V7 419 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CLMPQ9H6B4 373 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 ASB8Q9H765 288 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 IL1RAPQ9NPH3 570 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 IL26Q9NPH9 171 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 CCDC177Q9NQR7 707 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-202ENST00000381990 SLC25A37Q9NYZ2 338 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 RAPGEFL1Q9UHV5 662 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 PEX16Q9Y5Y5 336 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 U3KQV3 271 aa8.66□□□□□ -1.02
GPNMB-202ENST00000381990 GLYATL1P3A0A0U1RQE8 302 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 NPIPB15A6NHN6 443 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 GRXCR1A8MXD5 290 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 EVPLLA8MZ36 301 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 SLC28A1O00337 649 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 GPR39O43194 453 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 SEC22BO75396 215 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 CCNKO75909 580 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 S100BP04271 92 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 FPR1P21462 350 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 RPS3P23396 243 aaKnown RBP eCLIP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 SPAM1P38567 509 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ARL1P40616 181 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 KRT6CP48668 564 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 HK3P52790 923 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ABHD18Q0P651 414 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ELP6Q0PNE2 266 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 NFATC2Q13469 925 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 SIM2Q14190 667 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 FBXO43Q4G163 708 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 LRIF1Q5T3J3 769 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 DESI1Q6ICB0 168 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ADAMTSL2Q86TH1 951 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 FAM9CQ8IZT9 166 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 RBFAQ8N0V3 343 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 TMEM132CQ8N3T6 1108 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 CELF5Q8N6W0 485 aaKnown RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 TTC29Q8NA56 475 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 SIDT2Q8NBJ9 832 aaKnown RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 FAM120BQ96EK7 910 aaKnown RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 LINGO1Q96FE5 620 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 MCCC1Q96RQ3 725 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 PITX2Q99697 317 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 TBCDQ9BTW9 1192 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 CLPBQ9H078 707 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ZDHHC6Q9H6R6 413 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ZBTB20Q9HC78 741 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-202ENST00000381990 ZNF221Q9UK13 617 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 FBXO10Q9UK96 956 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 RNF6Q9Y252 685 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 CCL27Q9Y4X3 112 aa8.65□□□□□ -1.02
GPNMB-202ENST00000381990 WASH3PC4AMC7 463 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 WNT9AO14904 365 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 IDH3BO43837 385 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 SLC2A4P14672 509 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 KRT20P35900 424 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 CTSKP43235 329 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 RECQLP46063 649 aaPredicted RBP8.65□□□□□ -1.03
GPNMB-202ENST00000381990 SEPHS1P49903 392 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 DAPP51397 102 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 ARPC4P59998 168 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 ERVK-21P61565 698 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 COPZ1P61923 177 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 RPL38P63173 70 aaKnown RBP8.65□□□□□ -1.03
GPNMB-202ENST00000381990 GTF2H2Q13888 395 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 PTGR1Q14914 329 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 ABRAXAS2Q15018 415 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 COLEC12Q5KU26 742 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 MLIPQ5VWP3 458 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 RSBN1Q5VWQ0 802 aaPredicted RBP8.65□□□□□ -1.03
GPNMB-202ENST00000381990 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 CRTC1Q6UUV9 634 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 CCBE1Q6UXH8 406 aaPredicted RBP8.65□□□□□ -1.03
GPNMB-202ENST00000381990 GCNT7Q6ZNI0 430 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 Q6ZVU0 165 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 GALNT5Q7Z7M9 940 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 TSPAN33Q86UF1 283 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 PGBD3Q8N328 593 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 PARP16Q8N5Y8 322 aa8.65□□□□□ -1.03
GPNMB-202ENST00000381990 OR4F6Q8NGB9 312 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms