RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GRK5P34947 590 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 RFC3P40938 356 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 MAP2K3P46734 347 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 SPP2Q13103 211 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 SNAPC1Q16533 368 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 SPDYE7PQ495Y7 208 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 HAGHLQ6PII5 290 aaPredicted RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 ZPBP2Q6X784 338 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 AHSA2Q719I0 299 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 CMC1Q7Z7K0 106 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 HS3ST5Q8IZT8 346 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 GHDCQ8N2G8 530 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 TRMT10AQ8TBZ6 339 aaKnown RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 PARK7Q99497 189 aaKnown RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 CCM2Q9BSQ5 444 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 NTMT1Q9BV86 223 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 CPEB1Q9BZB8 566 aaKnown RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 SLC29A3Q9BZD2 475 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.96
PTPRA-204ENST00000380393 ADARB2Q9NS39 739 aaKnown RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 PPIEQ9UNP9 301 aaKnown RBP9.09□□□□□ -0.96
PTPRA-204ENST00000380393 GLTPD2A6NH11 291 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 UBDO15205 165 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CA12O43570 354 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 HPRP00739 348 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 F7P08709 466 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 H2AFB1P0C5Y9 115 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 H2AFB2P0C5Z0 115 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 HAPLN1P10915 354 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 UMPSP11172 480 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 ARSAP15289 507 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CDKN2BP42772 138 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 GRIA4P48058 902 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 FCN2Q15485 313 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 TIGD6Q17RP2 521 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 MPEG1Q2M385 716 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SEZ6Q53EL9 994 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 TMEM88Q6PEY1 159 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SCIMPQ6UWF3 145 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CIR1Q86X95 450 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 PLD6Q8N2A8 252 aaKnown RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 BVESQ8NE79 360 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 OR52K2Q8NGK3 314 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 POC1BQ8TC44 478 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 BRI3BPQ8WY22 251 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CCDC17Q96LX7 622 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 GAREM1Q9H706 876 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 MID2Q9UJV3 735 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SLC6A5Q9Y345 797 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SLC15A5A6NIM6 579 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 GUCA1CO95843 209 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 LALBAP00709 142 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 LPLP06858 475 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CNPP09543 421 aaKnown RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CD19P15391 556 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 OGDHQ02218 1023 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 TNFAIP1Q13829 316 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 LGALSLQ3ZCW2 172 aaPredicted RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 PRSS36Q5K4E3 855 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF470Q6ECI4 717 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 HACD2Q6Y1H2 254 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 KANSL1Q7Z3B3 1105 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SLC43A2Q8N370 569 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 PAPD5Q8NDF8 572 aaKnown RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 NXPE2Q96DL1 559 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 PEX11GQ96HA9 241 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 SENP8Q96LD8 212 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 AGAP2Q99490 1192 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 NEU1Q99519 415 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 TMEM175Q9BSA9 504 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 MRPL4Q9BYD3 311 aaKnown RBP9.08□□□□□ -0.96
PTPRA-204ENST00000380393 MED28Q9H204 178 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 CCNB1IP1Q9NPC3 277 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 KRT84Q9NSB2 600 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 C3orf18Q9UK00 162 aa9.08□□□□□ -0.96
PTPRA-204ENST00000380393 RHPN2P1A8MT19 583 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 G3V2L1 256 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SDHDO14521 159 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ZNF197O14709 1029 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 OGTO15294 1046 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PSMD10O75832 226 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ARIH2O95376 493 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 MYL3P08590 195 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 SERPINF2P08697 491 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CSF3P09919 207 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 CD72P21854 359 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 RORAP35398 523 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PTGFRP43088 359 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 NAGLUP54802 743 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 VEPH1Q14D04 833 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 NOL9Q5SY16 702 aaKnown RBP9.07□□□□□ -0.96
PTPRA-204ENST00000380393 PRAMEF13Q5VWM6 474 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 ANKS6Q68DC2 871 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 EFCAB12Q6NXP0 572 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 MOXD1Q6UVY6 613 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 LAX1Q8IWV1 398 aa9.07□□□□□ -0.96
PTPRA-204ENST00000380393 LIX1Q8N485 282 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms