RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 GMEB1Q9Y692 573 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 TTC28Q96AY4 2481 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 SCAMP2O15127 329 aaKnown RBP20.77■□□□□ 0.92
TRIM54-202ENST00000380075 VEGFDO43915 354 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 C6P13671 934 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 GPX2P18283 190 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 WNT3P56703 355 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DDX39BQ13838 428 aaKnown RBP20.77■□□□□ 0.92
TRIM54-202ENST00000380075 RAET1GQ6H3X3 334 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 SLCO4C1Q6ZQN7 724 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DSG4Q86SJ6 1040 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 TRAPPC5Q8IUR0 188 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 UBALD2Q8IYN6 164 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 PJA1Q8NG27 643 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 OR7A2PQ8NGA2 310 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 OR5K1Q8NHB7 308 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CHTF18Q8WVB6 975 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 GFM2Q969S9 779 aaKnown RBP20.77■□□□□ 0.92
TRIM54-202ENST00000380075 TBC1D20Q96BZ9 403 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CXorf40BQ96DE9 158 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 CHFRQ96EP1 664 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 EFCAB11Q9BUY7 163 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 OSBPL10Q9BXB5 764 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 SIRT5Q9NXA8 310 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 GULP1Q9UBP9 304 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 BTNL2Q9UIR0 455 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 DYRK1BQ9Y463 629 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 BDP1A6H8Y1 2624 aa20.77■□□□□ 0.92
TRIM54-202ENST00000380075 KIF26AQ9ULI4 1882 aaPredicted RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 MAGEB17A8MXT2 336 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CLIC1O00299 241 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 LZTS3O60299 673 aaPredicted RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 PPIBP23284 216 aaKnown RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 TTKP33981 857 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 GJA4P35212 333 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CDK9P50750 372 aaKnown RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 PPP2R2BQ00005 443 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 GAB4Q2WGN9 574 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 PAGE2BQ5JRK9 111 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 ANXA8L1Q5VT79 327 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CPZQ66K79 652 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CFAP206Q8IYR0 622 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 RNF175Q8N4F7 328 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 VPS37AQ8NEZ2 397 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 ZNF480Q8WV37 535 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 PHF12Q96QT6 1004 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 OR2AG1Q9H205 316 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CORO2BQ9UQ03 480 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 COQ6Q9Y2Z9 468 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 AP1M2Q9Y6Q5 423 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 FOXE1O00358 373 aaPredicted RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 MYCLP1P12525 358 aaPredicted RBP20.76■□□□□ 0.91
TRIM54-202ENST00000380075 HPCAL1P37235 193 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 MAGEA2P43356 314 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 HIPK1Q86Z02 1210 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 OR9A1PQ8NGU1 263 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 RAB7BQ96AH8 199 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 SGPP1Q9BX95 441 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 TMEM245Q9H330 911 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 AASDHPPTQ9NRN7 309 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 RPS6KA6Q9UK32 745 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 CA14Q9ULX7 337 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 PIAS3Q9Y6X2 628 aa20.76■□□□□ 0.91
TRIM54-202ENST00000380075 MUC22E2RYF6 1773 aaPredicted RBP20.75■□□□□ 0.91
TRIM54-202ENST00000380075 C1QTNF3-AMACRE9PGA6 284 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 ZNF701M0R085 212 aaPredicted RBP20.75■□□□□ 0.91
TRIM54-202ENST00000380075 SEC24DO94855 1032 aaPredicted RBP20.75■□□□□ 0.91
TRIM54-202ENST00000380075 HLA-EP13747 358 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 ENGP17813 658 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 SLC6A11P48066 632 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 CDH15P55291 814 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 TBPL1P62380 186 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 ZXDAP98168 799 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 ZNF234Q14588 700 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 VMACQ2NL98 169 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 RFX4Q33E94 735 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 GALNT18Q6P9A2 607 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 GPR155Q7Z3F1 870 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 GPR141Q7Z602 305 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 SYTL1Q8IYJ3 562 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 OFCC1Q8IZS5 231 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 C10orf111Q8N326 155 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 HUS1BQ8NHY5 278 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 FOXJ1Q92949 421 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 NEIL2Q969S2 332 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 MPP4Q96JB8 637 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 FAM129BQ96TA1 746 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 SH3GL3Q99963 347 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 DUSP26Q9BV47 211 aa20.75■□□□□ 0.91
TRIM54-202ENST00000380075 H3BSA7 217 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 NCOR1O75376 2440 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 CLIC3O95833 236 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 ANXA4P09525 319 aaPredicted RBP20.74■□□□□ 0.91
TRIM54-202ENST00000380075 METAP1P53582 386 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 VAC14Q08AM6 782 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 LAPTM5Q13571 262 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 RBBP5Q15291 538 aaKnown RBP20.74■□□□□ 0.91
TRIM54-202ENST00000380075 ZBED5Q49AG3 693 aa20.74■□□□□ 0.91
TRIM54-202ENST00000380075 ERN2Q76MJ5 926 aaKnown RBP20.74■□□□□ 0.91
TRIM54-202ENST00000380075 TMPRSS11BQ86T26 416 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms