RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 PLD3Q8IV08 490 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 TTLQ8NG68 377 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 CCNL2Q96S94 520 aaPredicted RBP12.64□□□□□ -0.39
CKAP2-202ENST00000378034 C1QTNF3Q9BXJ4 246 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 ASB1Q9Y576 335 aa12.64□□□□□ -0.39
CKAP2-202ENST00000378034 TEX51A0A1B0GUA7 166 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 A0A1B0GX78 115 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 FEZF1A0PJY2 475 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 FOXO6A8MYZ6 492 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 RGS16O15492 202 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 LCMT2O60294 686 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 PIM1P11309 404 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 EPORP19235 508 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ATP5F1P24539 256 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 IRF8Q02556 426 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TLE3Q04726 772 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 PWP1Q13610 501 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 HIST2H2ACQ16777 129 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 NDUFA9Q16795 377 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 XKR6Q5GH73 641 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 C16orf46Q6P387 395 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 VN1R4Q7Z5H5 301 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ASPGQ86U10 573 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TEX9Q8N6V9 391 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TRPV3Q8NET8 790 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 RDH11Q8TC12 318 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 CCDC126Q96EE4 140 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 PHF21BQ96EK2 531 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 MVB12AQ96EY5 273 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GBP5Q96PP8 586 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GPR87Q9BY21 358 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 STARD5Q9NSY2 213 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ARGLU1Q9NWB6 273 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ZFP69BQ9UJL9 534 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ASPMQ8IZT6 3477 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SPTBP11277 2137 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 URB1O60287 2271 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 FREM2Q5SZK8 3169 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 A8MT66 165 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 E2F3O00716 465 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 UGDHO60701 494 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 WFS1O76024 890 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 ONECUT2O95948 504 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 CD63P08962 238 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SLC35G6P0C7Q6 338 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 VARSP26640 1264 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 EEF1DP29692 281 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 DCDP81605 110 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 MEF2AQ02078 507 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 CHIT1Q13231 466 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GTF2H2Q13888 395 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 DOC2AQ14183 400 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 CEP85LQ5SZL2 805 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GTF2H2CQ6P1K8 395 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 PRMT9Q6P2P2 845 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TMIGD1Q6UXZ0 262 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TTLL10Q6ZVT0 673 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 C4orf33Q8N1A6 199 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SLC13A3Q8WWT9 602 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 MR1Q95460 341 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 UBE2E3Q969T4 207 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 APOPT1Q96IL0 206 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SMC6Q96SB8 1091 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 IQCGQ9H095 443 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 GPN2Q9H9Y4 310 aaPredicted RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 DHCR7Q9UBM7 475 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 MID2Q9UJV3 735 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 KCND3Q9UK17 655 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 EMCNQ9ULC0 261 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 CDC14AQ9UNH5 594 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 RUVBL1Q9Y265 456 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 PCDHGA6Q9Y5G7 932 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
CKAP2-202ENST00000378034 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
CKAP2-202ENST00000378034 LOC101059948A0A1B0GTJ6 334 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 TERTO14746 1132 aaKnown RBP12.62□□□□□ -0.39
CKAP2-202ENST00000378034 PLIN3O60664 434 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 SIX3O95343 332 aaPredicted RBP12.62□□□□□ -0.39
CKAP2-202ENST00000378034 PROCP04070 461 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
CKAP2-202ENST00000378034 RAB40ALP0C0E4 278 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 TCN2P20062 427 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 ALAS2P22557 587 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 NAA20P61599 178 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 FAM53BQ14153 422 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 HKDC1Q2TB90 917 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 ARHGEF39Q8N4T4 335 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 BANPQ8N9N5 519 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 ZNF740Q8NDX6 193 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 NT5CQ8TCD5 201 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 PGM2Q96G03 612 aa12.62□□□□□ -0.39
CKAP2-202ENST00000378034 SPNS1Q9H2V7 528 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms