RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 FOXD4Q12950 439 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SMU1Q2TAY7 513 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF675Q8TD23 568 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 MYDGFQ969H8 173 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 TTLL2Q9BWV7 592 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ZBP1Q9H171 429 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ELOVL6Q9H5J4 265 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PRM3Q9NNZ6 103 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 GPR83Q9NYM4 423 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 TRPS1Q9UHF7 1281 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 UPK3BL1B0FP48 263 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 UPK3BL2E5RIL1 263 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 LILRB3O75022 631 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 CLDN9O95484 217 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 PRAMEF1O95521 474 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 RHOCP08134 193 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 STSP08842 583 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ALPIP09923 528 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 DGKAP23743 735 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 OR1D2P34982 312 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 KRR1Q13601 381 aaKnown RBP10.73□□□□□ -0.69
CCDC40-203ENST00000374877 TBCEQ15813 527 aaPredicted RBP10.73□□□□□ -0.69
CCDC40-203ENST00000374877 TMC5Q6UXY8 1006 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 SLC46A3Q7Z3Q1 461 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 STX19Q8N4C7 294 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF461Q8TAF7 563 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 NELL1Q92832 810 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 CEP19Q96LK0 163 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 SIGLEC11Q96RL6 698 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 EBPLQ9BY08 206 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 MRPL17Q9NRX2 175 aaKnown RBP10.73□□□□□ -0.69
CCDC40-203ENST00000374877 RAPGEFL1Q9UHV5 662 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 PRSS21Q9Y6M0 314 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 FPGTO14772 594 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 SCAMP3O14828 347 aaKnown RBP10.73□□□□□ -0.69
CCDC40-203ENST00000374877 KMOO15229 486 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ADAM12O43184 909 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ZW10O43264 779 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 STK16O75716 305 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 FGF18O76093 207 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 EPN2O95208 641 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 C9P02748 559 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 CTSAP10619 480 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 SDC1P18827 310 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 KIR3DL1P43629 444 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 OR2B6P58173 313 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 PRKCDQ05655 676 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 TP53BP2Q13625 1128 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 AGAP6Q5VW22 663 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 OR8H2Q8N162 312 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 CHCHD4Q8N4Q1 142 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 LILRB4Q8NHJ6 448 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 USP7Q93009 1102 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 TBC1D20Q96BZ9 403 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 AGAP4Q96P64 663 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 PITX2Q99697 317 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ASB8Q9H765 288 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 RAD18Q9NS91 495 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 WDR70Q9NW82 654 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ERVK13-1Q9NX77 482 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 ASIC5Q9NY37 505 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 PSORS1C1Q9UIG5 152 aa10.73□□□□□ -0.69
CCDC40-203ENST00000374877 A8MV72 311 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 KDELR3O43731 214 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 IGLV3-27P01718 113 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 CA5AP35218 305 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ARMCX4Q5H9R4 360 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ZZZ3Q8IYH5 903 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 ELMOD1Q8N336 334 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 BEND7Q8N7W2 519 aaPredicted RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 UTP15Q8TED0 518 aaKnown RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 GGHQ92820 318 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 KCNS3Q9BQ31 491 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 NTMT1Q9BV86 223 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 CRISPLD1Q9H336 500 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 IL17CQ9P0M4 197 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 PEX16Q9Y5Y5 336 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 PLXNA3P51805 1871 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 KCNK5O95279 499 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 PTHP01270 115 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 RRM2P31350 389 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 DUSP4Q13115 394 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 SERPINA11Q86U17 422 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 TCAIMQ8N3R3 496 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 IL17RDQ8NFM7 739 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 EID2BQ96D98 161 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 APIPQ96GX9 242 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 HRASLS5Q96KN8 279 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 DMRTB1Q96MA1 342 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 SPASTQ9UBP0 616 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 WBP11Q9Y2W2 641 aaKnown RBP10.72□□□□□ -0.69
CCDC40-203ENST00000374877 N6AMT1Q9Y5N5 214 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 GREB1Q4ZG55 1949 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 LINC00854A0A1B0GVQ3 168 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 LOC110117498-PIK3R3F6TDL0 507 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 M0R129 80 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 GUCY1B2O75343 617 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 CDK1P06493 297 aa10.72□□□□□ -0.69
CCDC40-203ENST00000374877 PRPS2P11908 318 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms